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    UBE3C ubiquitin protein ligase E3C [ Manacus candei (White-collared manakin) ]

    Gene ID: 127482515, updated on 3-Aug-2024

    Summary

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    Gene symbol
    UBE3C
    Gene description
    ubiquitin protein ligase E3C
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manacus candei
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
    Orthologs
    human mouse all
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    Genomic context

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    See UBE3C in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2023_02 current ASM2559294v1 (GCF_025592945.1) Unplaced Scaffold NW_026138137.1 (2119463..2193432, complement)

    NW_026138137.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene uncharacterized LOC127482509 Neighboring gene DnaJ heat shock protein family (Hsp40) member B6 Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene nucleolar protein with MIF4G domain 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026138137 Unplaced Scaffold Reference ASM2559294v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-protein ligase E3C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_025592945.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2559294v1

    Genomic

    1. NW_026138137.1 Reference ASM2559294v1

      Range
      2119463..2193432 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051812888.1 → XP_051668848.1  ubiquitin-protein ligase E3C

    Nucleotide Protein
    Heading Accession and Version

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