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    LOC127783937 probable CCR4-associated factor 1 homolog 7 [ Oryza glaberrima (African rice) ]

    Gene ID: 127783937, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC127783937
    Gene description
    probable CCR4-associated factor 1 homolog 7
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza glaberrima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current OglaRS2 (GCF_000147395.1) 9 NC_068334.1 (13968587..13969793)

    Chromosome 9 - NC_068334.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127783936 Neighboring gene Golgi SNAP receptor complex member 1-1-like Neighboring gene protein spotted leaf 11 Neighboring gene bHLH transcription factor RHL1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_068334.1 Chromosome 9 Reference OglaRS2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A)-specific ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of CCR4-NOT core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable CCR4-associated factor 1 homolog 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza glaberrima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OglaRS2 Primary Assembly

    Genomic

    1. NC_068334.1 Reference OglaRS2 Primary Assembly

      Range
      13968587..13969793
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052311094.1 → XP_052167054.1  probable CCR4-associated factor 1 homolog 7

      UniProtKB/TrEMBL
      I1QNY0
    Nucleotide Protein
    Heading Accession and Version

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