U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 [ Harpia harpyja (harpy eagle) ]

    Gene ID: 128146872, updated on 20-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SMARCA4
    Gene description
    SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Harpia harpyja
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Harpia
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SMARCA4 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    RS_2023_02 current bHarHar1 primary haplotype (GCF_026419915.1) 10 NC_068949.1 (405138..434808, complement)

    Chromosome 10 - NC_068949.1Genomic Context describing neighboring genes Neighboring gene KN motif and ankyrin repeat domains 2 Neighboring gene low density lipoprotein receptor Neighboring gene translocase of inner mitochondrial membrane 29 Neighboring gene Yip1 domain family member 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_068949.1 Chromosome 10 Reference bHarHar1 primary haplotype

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription activator BRG1
    Names
    SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_026419915.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bHarHar1 primary haplotype

    Genomic

    1. NC_068949.1 Reference bHarHar1 primary haplotype

      Range
      405138..434808 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052798768.1 → XP_052654728.1  transcription activator BRG1 isoform X5

    2. XM_052798767.1 → XP_052654727.1  transcription activator BRG1 isoform X4

    3. XM_052798765.1 → XP_052654725.1  transcription activator BRG1 isoform X2

    4. XM_052798764.1 → XP_052654724.1  transcription activator BRG1 isoform X1

    5. XM_052798770.1 → XP_052654730.1  transcription activator BRG1 isoform X7

    6. XM_052798769.1 → XP_052654729.1  transcription activator BRG1 isoform X6

    7. XM_052798766.1 → XP_052654726.1  transcription activator BRG1 isoform X3

    8. XM_052798771.1 → XP_052654731.1  transcription activator BRG1 isoform X8

    9. XM_052798772.1 → XP_052654732.1  transcription activator BRG1 isoform X9

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.