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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference assembly
Genomic
-
NC_004346.1 Reference assembly
- Range
-
605..3504
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NP_715627.2 polyprotein P2ab [Subterranean clover mottle virus]
Status: PROVISIONAL
- UniProtKB/TrEMBL
-
Q8BEQ2
- Conserved Domains (2) summary
-
- pfam02123
Location:475 → 846
- RdRP_4; Viral RNA-directed RNA-polymerase
- pfam13365
Location:169 → 290
- Trypsin_2; Trypsin-like peptidase domain
-
NP_736579.1 serine protease
- Conserved Domains (1) summary
-
- cl21584
Location:169 → 290
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
-
NP_736580.1 putative VPg protein
-
NP_736581.1 RNA-dependent RNA polymerase
- Conserved Domains (1) summary
-
- pfam02123
Location:70 → 441
- RdRP_4; Viral RNA-directed RNA-polymerase