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    Arf79F ADP-ribosylation factor 1 [ Anopheles funestus (African malaria mosquito) ]

    Gene ID: 125768350, updated on 24-May-2024

    Summary

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    Gene symbol
    Arf79F
    Gene description
    ADP-ribosylation factor 1
    See related
    VectorBase:AFUN2_013452; EnsemblRapid:AFUN2_013452
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Anopheles funestus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Orthologs
    fruit fly all
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    Genomic context

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    See Arf79F in Genome Data Viewer
    Location:
    chromosome: 3RL
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current idAnoFuneDA-416_04 (GCF_943734845.2) 3RL NC_064599.1 (60325557..60337578, complement)

    Chromosome 3RL - NC_064599.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125768414 Neighboring gene uncharacterized LOC125768352 Neighboring gene sorting nexin-8-like Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like Neighboring gene uncharacterized LOC125768436

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064599.1 Chromosome 3RL Reference idAnoFuneDA-416_04 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A de novo expression profiling of Anopheles funestus, malaria vector in Africa, using 454 pyrosequencing. Gregory R, et al. PLoS One, 2011 Feb 25. PMID 21364769, Free PMC Article
    2. De novo transcriptome sequencing in Anopheles funestus using Illumina RNA-seq technology. Crawford JE, et al. PLoS One, 2010 Dec 2. PMID 21151993, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pericentric heterochromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor 1; pneumococcal serine-rich repeat protein
    XP_049291823.1
    XP_049291824.1
    XP_049291825.1
    XP_049291826.1
    XP_049291827.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001418044.1 → NP_001404973.1  ADP-ribosylation factor 1

      Status: VALIDATED

      Source sequence(s)
      OX030924
      UniProtKB/TrEMBL
      A0A182RY39

    RefSeqs of Annotated Genomes: Anopheles funestus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoFuneDA-416_04 Primary Assembly

    Genomic

    1. NC_064599.1 Reference idAnoFuneDA-416_04 Primary Assembly

      Range
      60325557..60337578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_049435870.1 → XP_049291827.1  ADP-ribosylation factor 1 isoform X3

      UniProtKB/TrEMBL
      A0A182RY39

    2. XM_049435868.1 → XP_049291825.1  ADP-ribosylation factor 1 isoform X3

    3. XM_049435869.1 → XP_049291826.1  ADP-ribosylation factor 1 isoform X3

      UniProtKB/TrEMBL
      A0A182RY39

    4. XM_049435867.1 → XP_049291824.1  pneumococcal serine-rich repeat protein isoform X2

    5. XM_049435866.1 → XP_049291823.1  pneumococcal serine-rich repeat protein isoform X1

      Related
      AFUN2_013452, AFUN2_013452
    Nucleotide Protein
    Heading Accession and Version

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