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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001411010.1 → NP_001397939.1 E3 ubiquitin-protein ligase HECTD1 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL121808, AL136418, KC877516
- Consensus CDS
-
CCDS91860.1
- UniProtKB/TrEMBL
-
A0A8I5QJU2
- Related
- ENSP00000510470.1, ENST00000692835.1
-
NM_015382.4 → NP_056197.3 E3 ubiquitin-protein ligase HECTD1 isoform 1
See identical proteins and their annotated locations for NP_056197.3
Status: VALIDATED
- Source sequence(s)
-
AB032957, AL136418, AY254380, BM977042, DA440215, DA509926, DA818448
- Consensus CDS
-
CCDS41939.1
- UniProtKB/Swiss-Prot
- D3DS86, Q6P445, Q86VJ1, Q96F34, Q9UFZ7, Q9ULT8
- UniProtKB/TrEMBL
-
H0YJP0
- Related
- ENSP00000382269.1, ENST00000399332.6
- Conserved Domains (6) summary
-
- cd00078
Location:2131 → 2608
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1335
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1892 → 1965
- BTHB; Basic tilted helix bundle domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
31100117..31207793 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017021153.2 → XP_016876642.1 E3 ubiquitin-protein ligase HECTD1 isoform X10
- UniProtKB/TrEMBL
- A0A8I5KU01, H0YJD4
- Related
- ENSP00000451260.2, ENST00000554882.6
-
XM_047431208.1 → XP_047287164.1 E3 ubiquitin-protein ligase HECTD1 isoform X11
-
XM_011536621.3 → XP_011534923.1 E3 ubiquitin-protein ligase HECTD1 isoform X9
See identical proteins and their annotated locations for XP_011534923.1
- UniProtKB/TrEMBL
-
A0A8I5KU01
- Conserved Domains (6) summary
-
- cd00078
Location:1852 → 2329
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1302
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1613 → 1686
- BTHB; Basic tilted helix bundle domain
-
XM_047431201.1 → XP_047287157.1 E3 ubiquitin-protein ligase HECTD1 isoform X4
-
XM_047431206.1 → XP_047287162.1 E3 ubiquitin-protein ligase HECTD1 isoform X7
-
XM_047431204.1 → XP_047287160.1 E3 ubiquitin-protein ligase HECTD1 isoform X6
-
XM_011536619.3 → XP_011534921.1 E3 ubiquitin-protein ligase HECTD1 isoform X2
See identical proteins and their annotated locations for XP_011534921.1
- UniProtKB/TrEMBL
- A0A087X2H1, H0YJP0
- Conserved Domains (6) summary
-
- cd00078
Location:2129 → 2606
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1335
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1890 → 1963
- BTHB; Basic tilted helix bundle domain
-
XM_047431202.1 → XP_047287158.1 E3 ubiquitin-protein ligase HECTD1 isoform X5
-
XM_005267502.4 → XP_005267559.2 E3 ubiquitin-protein ligase HECTD1 isoform X1
See identical proteins and their annotated locations for XP_005267559.2
- UniProtKB/Swiss-Prot
- D3DS86, Q6P445, Q86VJ1, Q96F34, Q9UFZ7, Q9ULT8
- UniProtKB/TrEMBL
-
H0YJP0
- Related
- ENSP00000450697.1, ENST00000553700.5
- Conserved Domains (6) summary
-
- cd00078
Location:2131 → 2608
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1335
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1892 → 1965
- BTHB; Basic tilted helix bundle domain
-
XM_017021152.3 → XP_016876641.1 E3 ubiquitin-protein ligase HECTD1 isoform X10
- UniProtKB/TrEMBL
- A0A8I5KU01, H0YJD4
-
XM_017021151.3 → XP_016876640.1 E3 ubiquitin-protein ligase HECTD1 isoform X9
- UniProtKB/TrEMBL
-
A0A8I5KU01
- Related
- ENSP00000508604.1, ENST00000691390.1
- Conserved Domains (6) summary
-
- cd00078
Location:1852 → 2329
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1302
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1613 → 1686
- BTHB; Basic tilted helix bundle domain
-
XM_047431207.1 → XP_047287163.1 E3 ubiquitin-protein ligase HECTD1 isoform X8
-
XM_017021149.3 → XP_016876638.1 E3 ubiquitin-protein ligase HECTD1 isoform X4
- UniProtKB/TrEMBL
-
H0YJP0
- Conserved Domains (6) summary
-
- cd00078
Location:2082 → 2559
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1321
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1843 → 1916
- BTHB; Basic tilted helix bundle domain
-
XM_047431205.1 → XP_047287161.1 E3 ubiquitin-protein ligase HECTD1 isoform X7
-
XM_017021148.3 → XP_016876637.1 E3 ubiquitin-protein ligase HECTD1 isoform X3
- UniProtKB/TrEMBL
- A0A8I5QJU2, H0YJP0
- Conserved Domains (6) summary
-
- cd00078
Location:2084 → 2561
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1321
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1845 → 1918
- BTHB; Basic tilted helix bundle domain
-
XM_047431203.1 → XP_047287159.1 E3 ubiquitin-protein ligase HECTD1 isoform X6
-
XM_024449526.2 → XP_024305294.1 E3 ubiquitin-protein ligase HECTD1 isoform X2
- UniProtKB/TrEMBL
- A0A087X2H1, H0YJP0
- Related
- ENSP00000484981.2, ENST00000611816.5
- Conserved Domains (6) summary
-
- cd00078
Location:2129 → 2606
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1335
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
- pfam18410
Location:1890 → 1963
- BTHB; Basic tilted helix bundle domain
-
XM_024449527.2 → XP_024305295.1 E3 ubiquitin-protein ligase HECTD1 isoform X5
- UniProtKB/TrEMBL
-
H0YJP0
- Conserved Domains (5) summary
-
- cd00078
Location:2070 → 2547
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:396 → 426
- ANK; ANK repeat [structural motif]
- pfam06701
Location:1277 → 1335
- MIB_HERC2; Mib_herc2
- pfam07738
Location:1107 → 1240
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam12796
Location:366 → 457
- Ank_2; Ankyrin repeats (3 copies)
-
XM_011536622.2 → XP_011534924.1 E3 ubiquitin-protein ligase HECTD1 isoform X12
- Conserved Domains (4) summary
-
- smart00119
Location:1605 → 2057
- HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
- cd00078
Location:1581 → 2058
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- pfam06701
Location:727 → 785
- MIB_HERC2; Mib_herc2
- cl23730
Location:557 → 690
- F5_F8_type_C; F5/8 type C domain
RNA
-
XR_001750215.3 RNA Sequence
- Related
-
ENST00000687002.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
25297934..25405840 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054375770.1 → XP_054231745.1 E3 ubiquitin-protein ligase HECTD1 isoform X1
- UniProtKB/Swiss-Prot
- D3DS86, Q6P445, Q86VJ1, Q96F34, Q9UFZ7, Q9ULT8
-
XM_054375776.1 → XP_054231751.1 E3 ubiquitin-protein ligase HECTD1 isoform X5
-
XM_054375772.1 → XP_054231747.1 E3 ubiquitin-protein ligase HECTD1 isoform X2
- UniProtKB/TrEMBL
-
A0A087X2H1
-
XM_054375786.1 → XP_054231761.1 E3 ubiquitin-protein ligase HECTD1 isoform X10
- UniProtKB/TrEMBL
-
H0YJD4
-
XM_054375787.1 → XP_054231762.1 E3 ubiquitin-protein ligase HECTD1 isoform X11
-
XM_054375783.1 → XP_054231758.1 E3 ubiquitin-protein ligase HECTD1 isoform X9
-
XM_054375775.1 → XP_054231750.1 E3 ubiquitin-protein ligase HECTD1 isoform X4
-
XM_054375781.1 → XP_054231756.1 E3 ubiquitin-protein ligase HECTD1 isoform X7
-
XM_054375779.1 → XP_054231754.1 E3 ubiquitin-protein ligase HECTD1 isoform X6
-
XM_054375785.1 → XP_054231760.1 E3 ubiquitin-protein ligase HECTD1 isoform X10
- UniProtKB/TrEMBL
-
H0YJD4
-
XM_054375784.1 → XP_054231759.1 E3 ubiquitin-protein ligase HECTD1 isoform X9
-
XM_054375782.1 → XP_054231757.1 E3 ubiquitin-protein ligase HECTD1 isoform X8
-
XM_054375774.1 → XP_054231749.1 E3 ubiquitin-protein ligase HECTD1 isoform X4
-
XM_054375780.1 → XP_054231755.1 E3 ubiquitin-protein ligase HECTD1 isoform X7
-
XM_054375773.1 → XP_054231748.1 E3 ubiquitin-protein ligase HECTD1 isoform X3
- UniProtKB/TrEMBL
-
A0A8I5QJU2
-
XM_054375778.1 → XP_054231753.1 E3 ubiquitin-protein ligase HECTD1 isoform X6
-
XM_054375771.1 → XP_054231746.1 E3 ubiquitin-protein ligase HECTD1 isoform X2
- UniProtKB/TrEMBL
-
A0A087X2H1
-
XM_054375777.1 → XP_054231752.1 E3 ubiquitin-protein ligase HECTD1 isoform X5
-
XM_054375788.1 → XP_054231763.1 E3 ubiquitin-protein ligase HECTD1 isoform X12
RNA
-
XR_008488851.1 RNA Sequence