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    SLF1 SMC5-SMC6 complex localization factor 1 [ Falco cherrug (Saker falcon) ]

    Gene ID: 102052961, updated on 3-Aug-2024

    Summary

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    Gene symbol
    SLF1
    Gene description
    SMC5-SMC6 complex localization factor 1
    See related
    EnsemblRapid:ENSFCHG00000010465
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Falco cherrug
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
    Also known as
    ANKRD32
    Orthologs
    human mouse all
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    Genomic context

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    See SLF1 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2023_04 current bFalChe1.pri (GCF_023634085.1) Z NC_073720.1 (78410233..78449744, complement)
    102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994849.1 (3004957..3042497)

    Chromosome Z - NC_073720.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 81 member B Neighboring gene multiple C2 and transmembrane domain containing 1 Neighboring gene KIAA0825 ortholog Neighboring gene ARB2 cotranscriptional regulator A Neighboring gene uncharacterized LOC114016991

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of double-strand break repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SMC5-SMC6 complex localization factor protein 1
    Names
    ankyrin repeat domain 32

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bFalChe1.pri Primary Assembly

    Genomic

    1. NC_073720.1 Reference bFalChe1.pri Primary Assembly

      Range
      78410233..78449744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055699908.1 → XP_055555883.1  SMC5-SMC6 complex localization factor protein 1 isoform X3

    2. XM_055699906.1 → XP_055555881.1  SMC5-SMC6 complex localization factor protein 1 isoform X1

    3. XM_055699907.1 → XP_055555882.1  SMC5-SMC6 complex localization factor protein 1 isoform X2

    4. XM_027811315.2 → XP_027667116.1  SMC5-SMC6 complex localization factor protein 1 isoform X4

      Conserved Domains (3) summary
      sd00045
      Location:570 → 601
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:574 → 661
      Ank_2; Ankyrin repeats (3 copies)
      cl00038
      Location:24 → 94
      BRCT; C-terminal domain of the breast cancer suppressor protein (BRCA1) and related domains

    5. XM_027811316.2 → XP_027667117.1  SMC5-SMC6 complex localization factor protein 1 isoform X4

      Conserved Domains (3) summary
      sd00045
      Location:570 → 601
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:574 → 661
      Ank_2; Ankyrin repeats (3 copies)
      cl00038
      Location:24 → 94
      BRCT; C-terminal domain of the breast cancer suppressor protein (BRCA1) and related domains
    Nucleotide Protein
    Heading Accession and Version

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