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    LOC109726190 putative lipid-transfer protein DIR1 [ Ananas comosus (pineapple) ]

    Gene ID: 109726190, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC109726190
    Gene description
    putative lipid-transfer protein DIR1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ananas comosus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Bromeliaceae; Bromelioideae; Ananas
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    Genomic context

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    See LOC109726190 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    1
    Annotation release Status Assembly LG Location
    100 current ASM154086v1 (GCF_001540865.1) 21 NC_033641.1 (1859854..1860660)

    Linkage Group 21 - NC_033641.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109726609 Neighboring gene dCTP pyrophosphatase 1-like Neighboring gene cytochrome c1-like Neighboring gene uncharacterized LOC109726830

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_033641.1 Chromosome 21 Reference ASM154086v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in systemic acquired resistance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative lipid-transfer protein DIR1
    Names
    PVR3-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ananas comosus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM154086v1 Primary Assembly

    Genomic

    1. NC_033641.1 Reference ASM154086v1 Primary Assembly

      Range
      1859854..1860660
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020255668.1 → XP_020111257.1  putative lipid-transfer protein DIR1

      UniProtKB/TrEMBL
      A0A199W5Y7, A0A6P5GTT3, Q8H286
      Conserved Domains (1) summary
      cd04660
      Location:38 → 111
      nsLTP_like; Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium ...
    Nucleotide Protein
    Heading Accession and Version

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