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    MICPUN_59883 predicted protein [ Micromonas commoda ]

    Gene ID: 8245145, updated on 25-Apr-2024

    Summary

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    Gene symbol
    MICPUN_59883
    Gene description
    predicted protein
    Locus tag
    MICPUN_59883
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas commoda (strain: RCC299)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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    Genomic context

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    See MICPUN_59883 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Sequence:
    Chromosome: 7; NC_013044.1 (365715..367256)

    Chromosome 7 - NC_013044.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013044.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA ligase (ATP) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of tRNA-splicing ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013044.1 Reference assembly

      Range
      365715..367256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002503459.1 → XP_002503505.1  predicted protein [Micromonas commoda]

      See identical proteins and their annotated locations for XP_002503505.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      C1E9Y5
      Conserved Domains (1) summary
      pfam01139
      Location:76 → 513
      RtcB; tRNA-splicing ligase RtcB
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C1E9Y5.1

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