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    LOC6738661 SOSS complex subunit C homolog [ Drosophila simulans ]

    Gene ID: 6738661, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6738661
    Gene description
    SOSS complex subunit C homolog
    Locus tag
    Dsimw501_GD14793
    See related
    EnsemblRapid:LOC6738661
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila simulans
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GD14793; GD14793-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6738661 in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Prin_Dsim_3.1 (GCF_016746395.2) 3L NC_052522.2 (18945040..18945617)
    102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 3L NC_052522.1 (18945024..18945653)

    Chromosome 3L - NC_052522.2Genomic Context describing neighboring genes Neighboring gene blocked early in transport 1 Neighboring gene MYC associated factor X Neighboring gene Methyltransferase like 5 Neighboring gene uncharacterized LOC27207677 Neighboring gene aldehyde dehydrogenase 7 family member A1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SOSS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SOSS complex subunit C homolog
    Names
    Dsim\GD14793
    Dsim\GD14793-PA
    dsim_GLEANR_14789

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dsim_3.1

    Genomic

    1. NC_052522.2 Reference Prin_Dsim_3.1

      Range
      18945040..18945617
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002085427.4 → XP_002085463.1  SOSS complex subunit C homolog

      See identical proteins and their annotated locations for XP_002085463.1

      UniProtKB/Swiss-Prot
      B4QQE2
      UniProtKB/TrEMBL
      A0A0J9RXZ6
      Related
      XP_002085463.1, XM_002085427.4
      Conserved Domains (1) summary
      pfam15925
      Location:17 → 106
      SOSSC; SOSS complex subunit C
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4QQE2.1 GenPept UniProtKB/Swiss-Prot:B4QQE2

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