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    LOC4345763 germin-like protein 8-14 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4345763, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4345763
    Gene description
    germin-like protein 8-14
    Locus tag
    OSNPB_080460000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    GER5; GLP1; GLP110; OsGER5; OsGLP1; OsJ_026469; P0690E03.8
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    Genomic context

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    See LOC4345763 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (22696859..22698055, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (22558006..22559092, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene 12-oxophytodienoate reductase 7-like Neighboring gene germin-like protein 8-13 Neighboring gene uncharacterized LOC136351519 Neighboring gene uncharacterized LOC136351343

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transgenically expressed rice germin-like protein1 in tobacco causes hyper-accumulation of H2O2 and reinforcement of the cell wall components. Banerjee J, et al. Biochem Biophys Res Commun, 2010 Nov 26. PMID 20971065
    2. Functional role of rice germin-like protein1 in regulation of plant height and disease resistance. Banerjee J, et al. Biochem Biophys Res Commun, 2010 Mar 26. PMID 20188068
    3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. OsGLP1 with its inherent SOD activity is responsible for hyper-accumulation of H(2)O(2) and reinforcement of the cell wall components.
      Title: Transgenically expressed rice germin-like protein1 in tobacco causes hyper-accumulation of H2O2 and reinforcement of the cell wall components.
    2. OsGLP1 plays the role in regulation of plant height and disease resistance in rice plant.
      Title: Functional role of rice germin-like protein1 in regulation of plant height and disease resistance.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell wall IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    germin-like protein 8-14
    Names
    LOC_Os08g35760
    P0493A04.40
    germin-like protein 1
    germin-like protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001403631.1 → NP_001390560.1  germin-like protein 8-14 precursor

      Status: VALIDATED

      Source sequence(s)
      AU091475, AU198056, CI293704, CI404824
      UniProtKB/Swiss-Prot
      A0A0P0XGL0, O49001, O65044, Q6ZBZ2, Q9SAZ9
      UniProtKB/TrEMBL
      A2YVX9

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      22696859..22698055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6ZBZ2.1 GenPept UniProtKB/Swiss-Prot:Q6ZBZ2

    Gene LinkOut

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