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    RpS21 ribosomal protein S21 [ Drosophila willistoni ]

    Gene ID: 6643769, updated on 24-May-2024

    Summary

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    Gene symbol
    RpS21
    Gene description
    ribosomal protein S21
    Locus tag
    Dwil_GK24281
    See related
    EnsemblRapid:LOC6643769
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila willistoni
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    oho23B; GK24281; GK24281-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See RpS21 in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current UCI_dwil_1.1 (GCF_018902025.1) 2R Unlocalized Scaffold NW_025814050.1 (7239454..7240189, complement)
    101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032541.1 (5951269..5951966, complement)

    NW_025814050.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6643767 Neighboring gene microfibril-associated glycoprotein 4-like Neighboring gene ankyrin repeat domain-containing protein 29 Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S21
    Names
    Dwil\GK24281
    Dwil\GK24281-PA
    Overgrown hematopoietic organs at 23B
    dwil_GLEANR_8411

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCI_dwil_1.1

    Genomic

    1. NW_025814050.1 Reference UCI_dwil_1.1

      Range
      7239454..7240189 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002066915.4 → XP_002066951.1  40S ribosomal protein S21 isoform X1

      See identical proteins and their annotated locations for XP_002066951.1

      UniProtKB/Swiss-Prot
      B4N002
      Related
      XP_002066951.1, XM_002066915.4
      Conserved Domains (1) summary
      pfam01249
      Location:1 → 79
      Ribosomal_S21e; Ribosomal protein S21e

    2. XM_047010776.1 → XP_046866732.1  40S ribosomal protein S21 isoform X2

      Related
      XP_046866732.1, XM_047010776.1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4N002.1 GenPept UniProtKB/Swiss-Prot:B4N002

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