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    Fs(2)Ket Importin subunit beta Fs(2)Ket [ Bombus terrestris (buff-tailed bumblebee) ]

    Gene ID: 100642535, updated on 23-May-2024

    Summary

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    Gene symbol
    Fs(2)Ket
    Gene description
    Importin subunit beta Fs(2)Ket
    See related
    EnsemblRapid:ENSBTSG00005019668 EnsemblRapid:ENSBTSG00005025970
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bombus terrestris
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
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    Genomic context

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    See Fs(2)Ket in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current iyBomTerr1.2 (GCF_910591885.1) 13 NC_063281.1 (8106462..8162900, complement)
    102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B13 NC_015774.1 (2234023..2277250)

    Chromosome 13 - NC_063281.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100643092 Neighboring gene Carcinine transporter Neighboring gene COP9 signalosome subunit 8 Neighboring gene RAS oncogene family member RabX6 Neighboring gene Nfs1 cysteine desulfurase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Study of the Metatranscriptome of Eight Social and Solitary Wild Bee Species Reveals Novel Viruses and Bee Parasites. Schoonvaere K, et al. Front Microbiol, 2018. PMID 29491849, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear glucocorticoid receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear import signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear localization sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to corticotropin-releasing hormone stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    importin subunit beta-1; nuclear receptor subfamily 4 group A member 2; probable nuclear hormone receptor HR38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iyBomTerr1.2

    Genomic

    1. NC_063281.1 Reference iyBomTerr1.2

      Range
      8106462..8162900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020866212.2 → XP_020721871.1  importin subunit beta-1 isoform X3

      UniProtKB/TrEMBL
      A0A9B7I0U1
      Related
      ENSBTSP00005057580.1, ENSBTST00005075957.1

    2. XM_003400043.4 → XP_003400091.1  importin subunit beta-1 isoform X2

      UniProtKB/TrEMBL
      A0A9B7I0U1
      Related
      ENSBTSP00005039274.1, ENSBTST00005042566.1

    3. XM_012315325.2 → XP_012170715.1  importin subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0A9B2JS08

    4. XM_012315322.3 → XP_012170712.1  nuclear receptor subfamily 4 group A member 2 isoform X6

      UniProtKB/TrEMBL
      A0A9B2MPZ4
      Related
      ENSBTSP00005037928.1, ENSBTST00005058708.1
      Conserved Domains (2) summary
      cd07072
      Location:499 → 733
      NR_LBD_DHR38_like; Ligand binding domain of DHR38_like proteins, members of the nuclear receptor superfamily
      cd06969
      Location:397 → 471
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    5. XM_012315321.3 → XP_012170711.1  nuclear receptor subfamily 4 group A member 2 isoform X5

      UniProtKB/TrEMBL
      A0A9B2MP89
      Conserved Domains (2) summary
      cd07072
      Location:555 → 789
      NR_LBD_DHR38_like; Ligand binding domain of DHR38_like proteins, members of the nuclear receptor superfamily
      cd06969
      Location:453 → 527
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    6. XM_003400042.4 → XP_003400090.1  nuclear receptor subfamily 4 group A member 2 isoform X4

      UniProtKB/TrEMBL
      A0A9B0F732
      Related
      ENSBTSP00005066192.1, ENSBTST00005080671.1
      Conserved Domains (2) summary
      cd07072
      Location:556 → 790
      NR_LBD_DHR38_like; Ligand binding domain of DHR38_like proteins, members of the nuclear receptor superfamily
      cd06969
      Location:454 → 528
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    7. XM_012315323.3 → XP_012170713.1  probable nuclear hormone receptor HR38 isoform X7

      UniProtKB/TrEMBL
      A0A9B2JN76
      Related
      ENSBTSP00005039310.1, ENSBTST00005042435.1
      Conserved Domains (2) summary
      cd07072
      Location:400 → 634
      NR_LBD_DHR38_like; Ligand binding domain of DHR38_like proteins, members of the nuclear receptor superfamily
      cd06969
      Location:298 → 372
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
    Nucleotide Protein
    Heading Accession and Version

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