U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    CR3_gp247 putative DNA ligase [ Cronobacter phage CR3 ]

    Gene ID: 12979886, updated on 8-Jan-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    CR3_gp247
    Gene description
    putative DNA ligase
    Locus tag
    CR3_gp247
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cronobacter phage CR3 (nat-host: Cronobacter sakazakii)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Vequintavirinae; Certrevirus
    Old locus tag
    CR3_247
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_017974.1 (134556..135923, complement)

    NC_017974.1Genomic Context describing neighboring genes Neighboring gene FmdB-like transcriptional regulator Neighboring gene MazG-like pyrophosphatase Neighboring gene membrane protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_017974.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Complete genome sequence of Cronobacter sakazakii bacteriophage CR3. Shin H, et al. J Virol, 2012 Jun. PMID 22570242, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative DNA ligase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017974.1 Reference assembly

      Range
      134556..135923 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_006383262.1 putative DNA ligase [Cronobacter phage CR3]

      See identical proteins and their annotated locations for YP_006383262.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I1TRT9
      Conserved Domains (3) summary
      PHA02587
      Location:3 → 437
      30; DNA ligase; Provisional
      cl08424
      Location:338 → 405
      OBF_DNA_ligase_family; The Oligonucleotide/oligosaccharide binding (OB)-fold domain is a DNA-binding module that is part of the catalytic core unit of ATP dependent DNA ligases
      cl12015
      Location:130 → 334
      Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases