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    SLC8A3 solute carrier family 8 member A3 [ Microcebus murinus (gray mouse lemur) ]

    Gene ID: 105880277, updated on 13-Mar-2024

    Summary

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    Gene symbol
    SLC8A3
    Gene description
    solute carrier family 8 member A3
    See related
    Ensembl:ENSMICG00000011659
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microcebus murinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC8A3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current Mmur_3.0 (GCF_000165445.2) 3 NC_033662.1 (32933410..33074272)
    100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012197441.1 (3014988..3154655, complement)

    Chromosome 3 - NC_033662.1Genomic Context describing neighboring genes Neighboring gene synaptojanin 2 binding protein Neighboring gene cytochrome c oxidase assembly protein COX16 homolog, mitochondrial Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene SPARC related modular calcium binding 1 Neighboring gene solute carrier family 10 member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium:sodium antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/calcium exchanger 3
    Names
    solute carrier family 8 member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmur_3.0 Primary Assembly

    Genomic

    1. NC_033662.1 Reference Mmur_3.0 Primary Assembly

      Range
      32933410..33074272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020285702.1 → XP_020141291.1  sodium/calcium exchanger 3 isoform X1

      UniProtKB/TrEMBL
      A0A8B7HHG9, A0A8C5XJM0
      Related
      ENSMICP00000029087.2, ENSMICT00000051433.2
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 928
      caca; sodium/calcium exchanger 1

    2. XM_012781188.1 → XP_012636642.1  sodium/calcium exchanger 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C5VDE9, A0A8C5XJM0
      Related
      ENSMICP00000020357.2, ENSMICT00000054342.2
      Conserved Domains (4) summary
      TIGR00845
      Location:1 → 927
      caca; sodium/calcium exchanger 1
      pfam01699
      Location:753 → 918
      Na_Ca_ex; Sodium/calcium exchanger protein
      pfam03160
      Location:395 → 484
      Calx-beta; Calx-beta domain
      pfam16494
      Location:253 → 374
      Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

    3. XM_012781191.1 → XP_012636645.1  sodium/calcium exchanger 3 isoform X5

      UniProtKB/TrEMBL
      A0A8C5V5L2, A0A8C5XJM0
      Related
      ENSMICP00000010606.2, ENSMICT00000011655.3
      Conserved Domains (4) summary
      TIGR00845
      Location:1 → 921
      caca; sodium/calcium exchanger 1
      pfam01699
      Location:747 → 912
      Na_Ca_ex; Sodium/calcium exchanger protein
      pfam03160
      Location:395 → 484
      Calx-beta; Calx-beta domain
      pfam16494
      Location:253 → 374
      Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

    4. XM_012781193.1 → XP_012636647.1  sodium/calcium exchanger 3 isoform X7

      UniProtKB/TrEMBL
      A0A8B7HI84
      Conserved Domains (1) summary
      pfam01699
      Location:110 → 275
      Na_Ca_ex; Sodium/calcium exchanger protein

    5. XM_012781186.2 → XP_012636640.1  sodium/calcium exchanger 3 isoform X1

      See identical proteins and their annotated locations for XP_012636640.1

      UniProtKB/TrEMBL
      A0A8B7HHG9, A0A8C5XJM0
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 928
      caca; sodium/calcium exchanger 1

    6. XM_012781189.2 → XP_012636643.1  sodium/calcium exchanger 3 isoform X3

      UniProtKB/TrEMBL
      A0A8B7HK10, A0A8C5XJM0
      Conserved Domains (4) summary
      TIGR00845
      Location:1 → 927
      caca; sodium/calcium exchanger 1
      pfam01699
      Location:753 → 918
      Na_Ca_ex; Sodium/calcium exchanger protein
      pfam03160
      Location:395 → 484
      Calx-beta; Calx-beta domain
      pfam16494
      Location:253 → 374
      Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

    7. XM_012781190.2 → XP_012636644.1  sodium/calcium exchanger 3 isoform X4

      UniProtKB/TrEMBL
      A0A8B7HHE5, A0A8C5XJM0
      Conserved Domains (4) summary
      TIGR00845
      Location:1 → 922
      caca; sodium/calcium exchanger 1
      pfam01699
      Location:748 → 913
      Na_Ca_ex; Sodium/calcium exchanger protein
      pfam03160
      Location:395 → 484
      Calx-beta; Calx-beta domain
      pfam16494
      Location:253 → 374
      Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

    8. XM_012781192.2 → XP_012636646.1  sodium/calcium exchanger 3 isoform X6

      UniProtKB/TrEMBL
      A0A8B7HHE4, A0A8C5XJM0
      Conserved Domains (4) summary
      TIGR00845
      Location:1 → 920
      caca; sodium/calcium exchanger 1
      pfam01699
      Location:746 → 911
      Na_Ca_ex; Sodium/calcium exchanger protein
      pfam03160
      Location:395 → 484
      Calx-beta; Calx-beta domain
      pfam16494
      Location:253 → 374
      Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

    9. XM_012781187.1 → XP_012636641.1  sodium/calcium exchanger 3 isoform X1

      See identical proteins and their annotated locations for XP_012636641.1

      UniProtKB/TrEMBL
      A0A8B7HHG9, A0A8C5XJM0
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 928
      caca; sodium/calcium exchanger 1
    Nucleotide Protein
    Heading Accession and Version

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