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    Tsac_2883 transcriptional regulator [ Thermoanaerobacterium phage THSA-485A ]

    Gene ID: 13385257, updated on 8-Jan-2023

    Summary

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    Gene symbol
    Tsac_2883
    Gene description
    transcriptional regulator
    Locus tag
    Tsac_2883
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Thermoanaerobacterium phage THSA-485A (nat-host: Thermoanaerobacterium saccharolyticum JW/SL-YS485, culture-collection: DSM:8691)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Siphoviridae
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    Genomic context

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    Sequence:
    NC_018264.1 (39447..39893)

    NC_018264.1Genomic Context describing neighboring genes Neighboring gene transcriptional regulator, XRE family Neighboring gene hypothetical protein Neighboring gene helix-turn-helix domain protein Neighboring gene metallo-protease Neighboring gene integrase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_018264.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Profile of secreted hydrolases, associated proteins, and SlpA in Thermoanaerobacterium saccharolyticum during the degradation of hemicellulose. Currie DH, et al. Appl Environ Microbiol, 2014 Aug. PMID 24907337, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transcriptional regulator
    YP_006546324.1
    • KEGG: ccb:Clocel_2648 helix-turn-helix domain-containing protein
      PFAM: Helix-turn-helix type 3
      SMART: Helix-turn-helix type 3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_018264.1 Reference assembly

      Range
      39447..39893
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_006546324.1 transcriptional regulator [Thermoanaerobacterium phage THSA-485A]

      See identical proteins and their annotated locations for YP_006546324.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I3VYZ1
      Conserved Domains (1) summary
      cd00093
      Location:4 → 60
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
    Nucleotide Protein
    Heading Accession and Version

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