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    TBLA0B04150 hypothetical protein [ Tetrapisispora blattae CBS 6284 ]

    Gene ID: 14494571, updated on 21-Dec-2023

    Summary

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    Gene symbol
    TBLA0B04150
    Gene description
    hypothetical protein
    Locus tag
    TBLA_0B04150
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Tetrapisispora blattae CBS 6284 (strain: type strain:CBS 6284)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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    Genomic context

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    See TBLA0B04150 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_020186.1 (956920..960366)

    Chromosome 2 - NC_020186.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Cys Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_020186.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonucleoside binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_004178772.1
    • similar to Saccharomyces cerevisiae RET1 (YOR207C); ancestral locus Anc_8.619

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_020186.1 Reference assembly

      Range
      956920..960366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004178724.1 → XP_004178772.1  hypothetical protein TBLA_0B04150 [Tetrapisispora blattae CBS 6284]

      See identical proteins and their annotated locations for XP_004178772.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I2GYQ1
      Conserved Domains (4) summary
      COG0085
      Location:27 → 1146
      RpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription]
      cd00653
      Location:58 → 1140
      RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
      pfam04561
      Location:202 → 379
      RNA_pol_Rpb2_2; RNA polymerase Rpb2, domain 2
      pfam04566
      Location:556 → 617
      RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    Nucleotide Protein
    Heading Accession and Version

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