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    A1122_RS01015 LysR family transcriptional regulator [ Yersinia pestis A1122 ]

    Gene ID: 57973836, updated on 6-Jun-2024

    Summary

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    Gene symbol
    A1122_RS01015
    Gene description
    LysR family transcriptional regulator
    Locus tag
    A1122_RS01015
    Gene type
    protein coding
    Organism
    Yersinia pestis A1122 (strain: A1122)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
    Old locus tag
    A1122_01045
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    Genomic context

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    Sequence:
    NC_017168.1 (225063..225971)

    NC_017168.1Genomic Context describing neighboring genes Neighboring gene methyl-accepting chemotaxis protein Neighboring gene DsbA family protein Neighboring gene MBL fold metallo-hydrolase Neighboring gene MFS transporter Neighboring gene LysR family transcriptional regulator Neighboring gene diaminopimelate decarboxylase Neighboring gene HTH-type transcriptional regulator GalR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_017168.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular biology of the LysR family of transcriptional regulators. Schell MA. Annu Rev Microbiol, 1993. PMID 8257110
    2. Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins. Maddocks SE, et al. Microbiology (Reading), 2008 Dec. PMID 19047729
    3. Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931590, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LysR family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017168.1 Reference assembly

      Range
      225063..225971
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002209849.1 MULTISPECIES: LysR family transcriptional regulator [Yersinia pseudotuberculosis complex]

      See identical proteins and their annotated locations for WP_002209849.1

      UniProtKB/TrEMBL
      A0A0E1NY39, A0A0H2W7U5, A0A0H2YK18, A0A0U1QXC3, A0A384LCB1, A0A3G5L3Y3, A0A5P8YCZ6, A0A9P2W201, A0A9X3BKX2, A0AAC8R6X3, Q0WIN4, Q74S02, Q7CGY9
      Conserved Domains (2) summary
      cd08422
      Location:92 → 287
      PBP2_CrgA_like; The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
      pfam00126
      Location:8 → 63
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
    Nucleotide Protein
    Heading Accession and Version

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