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    A1122_RS15830 tyrosine-type recombinase/integrase [ Yersinia pestis A1122 ]

    Gene ID: 57976578, updated on 10-Oct-2024

    Summary

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    Gene symbol
    A1122_RS15830
    Gene description
    tyrosine-type recombinase/integrase
    Locus tag
    A1122_RS15830
    Gene type
    protein coding
    Organism
    Yersinia pestis A1122 (strain: A1122)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
    Old locus tag
    A1122_15720
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    Genomic context

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    Sequence:
    NC_017168.1 (3397978..3399216)

    NC_017168.1Genomic Context describing neighboring genes Neighboring gene excisionase family protein Neighboring gene IS21-like element IS100kyp family helper ATPase IstB Neighboring gene IS21-like element IS100 family transposase Neighboring gene YcgN family cysteine cluster protein Neighboring gene fumarylacetoacetate hydrolase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_017168.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Flexibility in DNA recombination: structure of the lambda integrase catalytic core. Kwon HJ, et al. Science, 1997 Apr 4. PMID 9082984, Free PMC Article
    2. Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Guo F, et al. Nature, 1997 Sep 4. PMID 9288963
    3. Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931590, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    tyrosine-type recombinase/integrase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017168.1 Reference assembly

      Range
      3397978..3399216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002211738.1 tyrosine-type recombinase/integrase [Yersinia pestis]

      See identical proteins and their annotated locations for WP_002211738.1

      UniProtKB/TrEMBL
      A0A0E1NX33, A0A0H2YIK8, A0A3G5LCB2, A0AAN0TUU0, A0AAP9G0E2
      Conserved Domains (3) summary
      cd01189
      Location:190 → 382
      INT_ICEBs1_C_like; C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons
      pfam12167
      Location:7 → 53
      Arm-DNA-bind_2; Arm DNA-binding domain
      cl00213
      Location:138 → 232
      DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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