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    PP1 polyprotien 1 [ Cycas necrotic stunt virus ]

    Gene ID: 988023, updated on 18-Aug-2023

    Summary

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    Gene symbol
    PP1
    Gene description
    polyprotien 1
    Locus tag
    CNSVs1gp1
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Cycas necrotic stunt virus
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Secoviridae; Comovirinae; Nepovirus
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    Genomic context

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    Location:
    segment: RNA 1
    Sequence:
    NC_003791.1 (157..7167)

    NC_003791.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003791.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence and taxonomy of Cycas necrotic stunt virus. Brief report. Han SS, et al. Arch Virol, 2002 Nov. PMID 12417954

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    polyprotien 1
    Names
    protease cofactor
    NTP-binding domain
    VPg
    cysteine protease
    RNA-dependent RNA polymerase
    NP_620619.1
    • contains RNA polymerase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003791.1 Reference assembly

      Range
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_620619.1 polyprotien 1 [Cycas necrotic stunt virus]

      See identical proteins and their annotated locations for NP_620619.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8QVV0
      UniProtKB/TrEMBL
      A0A5H3CVQ5
      Conserved Domains (3) summary
      cd01699
      Location:1691 → 1965
      RNA_dep_RNAP; RNA_dep_RNAP: RNA-dependent RNA polymerase (RdRp) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage. RdRp catalyzes synthesis of the RNA strand complementary to a given RNA template. RdRps of many viruses are ...
      TIGR02794
      Location:167 → 320
      tolA_full; TolA protein
      pfam00910
      Location:823 → 926
      RNA_helicase; RNA helicase

    2. NP_734013.1 protease cofactor

      Conserved Domains (1) summary
      PTZ00121
      Location:172 → 321
      PTZ00121; MAEBL; Provisional

    3. NP_734014.2 NTP-binding domain

      Conserved Domains (1) summary
      pfam00910
      Location:264 → 367
      RNA_helicase; RNA helicase

    4. NP_734015.2 VPg

    5. NP_734016.2 cysteine protease

    6. NP_734017.2 RNA-dependent RNA polymerase

      Conserved Domains (1) summary
      cd01699
      Location:201 → 475
      RNA_dep_RNAP; RNA_dep_RNAP: RNA-dependent RNA polymerase (RdRp) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage. RdRp catalyzes synthesis of the RNA strand complementary to a given RNA template. RdRps of many viruses are ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8QVV0.1

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