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    LOC107276109 aspartic proteinase nepenthesin-2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 107276109, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC107276109
    Gene description
    aspartic proteinase nepenthesin-2
    Locus tag
    OSNPB_070533300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC107276109 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (21146952..21148484, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (20919212..20920793, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene aspartic proteinase nepenthesin-1 Neighboring gene WUSCHEL-related homeobox 13 Neighboring gene aspartic proteinase nepenthesin-1 Neighboring gene aspartic proteinase nepenthesin-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartic proteinase nepenthesin-2
    Names
    OSJNBa0039D04.19
    Os07g0533300
    putative aspartic proteinase nepenthesin II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      21146952..21148484 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015790744.3 → XP_015646230.1  aspartic proteinase nepenthesin-2

      UniProtKB/TrEMBL
      A2YM54, A3BKM3, Q69IR6
      Conserved Domains (1) summary
      cd05476
      Location:90 → 452
      pepsin_A_like_plant; Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants
    Nucleotide Protein
    Heading Accession and Version

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