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    EIF5A eukaryotic translation initiation factor 5A [ Bos taurus (domestic cattle) ]

    Gene ID: 444990, updated on 18-Aug-2024

    Summary

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    Gene symbol
    EIF5A
    Gene description
    eukaryotic translation initiation factor 5A
    See related
    BGD:BT28990; Ensembl:ENSBTAG00000002018
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See EIF5A in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (27015338..27020478)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 4 Neighboring gene Y-box binding protein 2 Neighboring gene G protein pathway suppressor 2 Neighboring gene neuralized E3 ubiquitin protein ligase 4 Neighboring gene uncharacterized LOC132343038

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning of bovine eIF5A and deoxyhypusine synthase cDNA. Huang JK, et al. DNA Seq, 2004 Feb. PMID 15354351
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The deduced bovine eIF5A protein is 100% identical to human Eif5A.
      Title: Molecular cloning of bovine eIF5A and deoxyhypusine synthase cDNA.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC128860

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of translational termination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 5A-1
    Names
    eIF-4D
    eIF-5A
    eIF-5A-1
    eIF-5A1
    eukaryotic initiation factor 5A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003658.2 → NP_001003658.1  eukaryotic translation initiation factor 5A-1

      See identical proteins and their annotated locations for NP_001003658.1

      Status: PROVISIONAL

      Source sequence(s)
      BC108135
      UniProtKB/Swiss-Prot
      Q32PF5, Q6EWQ7
      UniProtKB/TrEMBL
      A0AAF6YJ88, A0AAF7AHP7
      Related
      ENSBTAP00000081787.1, ENSBTAT00000094840.1
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      27015338..27020478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015458612.3 → XP_015314098.1  eukaryotic translation initiation factor 5A-1 isoform X1

      UniProtKB/Swiss-Prot
      Q32PF5, Q6EWQ7
      UniProtKB/TrEMBL
      A0AAF6YJ88, A0AAF7AHP7
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    2. XM_059877785.1 → XP_059733768.1  eukaryotic translation initiation factor 5A-1 isoform X1

      UniProtKB/Swiss-Prot
      Q32PF5, Q6EWQ7
      UniProtKB/TrEMBL
      A0AAF6YJ88, A0AAF7AHP7

    3. XM_024979699.2 → XP_024835467.1  eukaryotic translation initiation factor 5A-1 isoform X1

      UniProtKB/Swiss-Prot
      Q32PF5, Q6EWQ7
      UniProtKB/TrEMBL
      A0AAF6YJ88, A0AAF7AHP7
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    4. XM_024979700.2 → XP_024835468.1  eukaryotic translation initiation factor 5A-1 isoform X1

      UniProtKB/Swiss-Prot
      Q32PF5, Q6EWQ7
      UniProtKB/TrEMBL
      A0AAF6YJ88, A0AAF7AHP7
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6EWQ7.3 GenPept UniProtKB/Swiss-Prot:Q6EWQ7

    Gene LinkOut

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