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    FF12_gp1 polyprotein [ megrivirus A2 ]

    Gene ID: 19484578, updated on 13-Aug-2022

    Summary

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    Gene symbol
    FF12_gp1
    Gene description
    polyprotein
    Locus tag
    FF12_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    megrivirus A2 (strain: LY, nat-host: Anas platyrhynchos)
    Lineage
    Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Megrivirus
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    Genomic context

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    Sequence:
    NC_024120.1 (522..9041)

    NC_024120.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_024120.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic characterization of a novel picornavirus in Pekin ducks. Liao Q, et al. Vet Microbiol, 2014 Aug 6. PMID 24933161

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    polyprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_024120.1 Reference assembly

      Range
      522..9041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009030047.1 polyprotein [megrivirus A2]

      See identical proteins and their annotated locations for YP_009030047.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A059PX37
      Conserved Domains (5) summary
      cd00205
      Location:370 → 576
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam00548
      Location:2186 → 2347
      Peptidase_C3; 3C cysteine protease (picornain 3C)
      cl13999
      Location:614 → 803
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam00910
      Location:1742 → 1844
      RNA_helicase; RNA helicase
      cd23223
      Location:2391 → 2822
      Megrivirus_RdRp; RNA-dependent RNA polymerase (RdRp) in the genus Megrivirus of positive-sense single-stranded RNA [(+)ssRNA] viruses, within the family Picornaviridae
    Nucleotide Protein
    Heading Accession and Version

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