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    UL20 envelope protein UL20 [ Suid alphaherpesvirus 1 ]

    Gene ID: 2952542, updated on 18-Aug-2023

    Summary

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    Gene symbol
    UL20
    Gene description
    envelope protein UL20
    Locus tag
    SuHV1_gp38
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Suid alphaherpesvirus 1 (strain: Composite of 6 strains, acronym: PRV, acronym: SuHV-1, nat-host: Sus scrofa)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus
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    Genomic context

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    Sequence:
    NC_006151.1 (66121..66658)

    NC_006151.1Genomic Context describing neighboring genes Neighboring gene capsid scaffold protein Neighboring gene capsid maturation protease Neighboring gene DNA packaging tegument protein UL25 Neighboring gene nuclear protein UL24 Neighboring gene thymidine kinase Neighboring gene envelope glycoprotein H Neighboring gene tegument protein UL21 Neighboring gene major capsid protein Neighboring gene capsid triplex subunit 2 Neighboring gene DNA packaging terminase subunit 1 Neighboring gene DNA packaging tegument protein UL17 Neighboring gene tegument protein UL16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006151.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete, annotated sequence of the pseudorabies virus genome. Klupp BG, et al. J Virol, 2004 Jan. PMID 14671123, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Miscellaneous features

    • Loc: 66151-66151 transcriptional initiation site inference = ab initio prediction:NNPP:

    regulatory

    • Loc: 66121-66127 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box
    • Loc: 66652-66658 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box
    • Loc: 66653-66658 inference = ab initio prediction:PolyADQ: , regulatory_class = polyA_signal_sequence

    General protein information

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    Preferred Names
    envelope protein UL20

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006151.1 Reference assembly

      Range
      66121..66658
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_068355.1 envelope protein UL20 [Suid alphaherpesvirus 1]

      See identical proteins and their annotated locations for YP_068355.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q00702
      UniProtKB/TrEMBL
      A0A142I9U9, Q04531, Q5PP94
      Conserved Domains (1) summary
      pfam04544
      Location:21 → 160
      Herpes_UL20; Herpesvirus egress protein UL20
    Nucleotide Protein
    Heading Accession and Version

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