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    SHC1 SHC adaptor protein 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100390337, updated on 6-Jun-2024

    Summary

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    Gene symbol
    SHC1
    Gene description
    SHC adaptor protein 1
    See related
    Ensembl:ENSCJAG00000009236
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    See SHC1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 18 NC_071459.1 (8942060..8954795, complement)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 18 NC_048400.1 (8949900..8962657, complement)

    Chromosome 18 - NC_071459.1Genomic Context describing neighboring genes Neighboring gene PBX homeobox interacting protein 1 Neighboring gene pygopus family PHD finger 2 Neighboring gene uncharacterized LOC128930128 Neighboring gene CDC28 protein kinase regulatory subunit 1B Neighboring gene flavin adenine dinucleotide synthetase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables receptor tyrosine kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SHC-transforming protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071459.1 Reference mCalJa1.2.pat.X

      Range
      8942060..8954795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035278965.2 → XP_035134856.1  SHC-transforming protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A2R8MZ10
      Conserved Domains (3) summary
      cd09925
      Location:363 → 466
      SH2_SHC; Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)
      PHA03247
      Location:262 → 381
      PHA03247; large tegument protein UL36; Provisional
      cd01209
      Location:36 → 207
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain

    2. XM_002760058.6 → XP_002760104.1  SHC-transforming protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A2R8MZ10
      Conserved Domains (2) summary
      cd09925
      Location:364 → 467
      SH2_SHC; Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)
      cd01209
      Location:36 → 207
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain

    3. XM_054247862.1 → XP_054103837.1  SHC-transforming protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A2R8MZ10

    4. XM_054247861.1 → XP_054103836.1  SHC-transforming protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A2R8MZ10

    5. XM_054247860.1 → XP_054103835.1  SHC-transforming protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A2R8MZ10

    6. XM_054247857.1 → XP_054103832.1  SHC-transforming protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A2R8MZ10

    7. XM_008984498.4 → XP_008982746.1  SHC-transforming protein 1 isoform X2

      See identical proteins and their annotated locations for XP_008982746.1

      UniProtKB/TrEMBL
      A0A2R8MZ10, F7C2B3
      Related
      ENSCJAP00000016965.2
      Conserved Domains (2) summary
      cd09925
      Location:474 → 577
      SH2_SHC; Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)
      cd01209
      Location:146 → 317
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain

    8. XM_008984499.4 → XP_008982747.1  SHC-transforming protein 1 isoform X4

      Conserved Domains (2) summary
      cd01209
      Location:36 → 207
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain
      cl15255
      Location:363 → 456
      SH2; Src homology 2 (SH2) domain

    9. XM_054247859.1 → XP_054103834.1  SHC-transforming protein 1 isoform X4

    10. XM_054247858.1 → XP_054103833.1  SHC-transforming protein 1 isoform X4

    11. XM_008984497.4 → XP_008982745.1  SHC-transforming protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2R8MZ10
      Conserved Domains (2) summary
      cd01209
      Location:146 → 317
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain
      cl15255
      Location:473 → 566
      SH2; Src homology 2 (SH2) domain
    Nucleotide Protein
    Heading Accession and Version

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