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    V522_s1gp1 RNA 1 polyprotein [ Potato black ringspot virus ]

    Gene ID: 17622580, updated on 18-Aug-2023

    Summary

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    Gene symbol
    V522_s1gp1
    Gene description
    RNA 1 polyprotein
    Locus tag
    V522_s1gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Potato black ringspot virus (isolate: PRI-Ec, nat-host: Solanum tuberosum)
    Lineage
    Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus
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    Genomic context

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    Location:
    segment: RNA 1
    Sequence:
    NC_022798.1 (108..7082)

    NC_022798.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_022798.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The complete genome sequences of two isolates of potato black ringspot virus and their relationship to other isolates and nepoviruses. Richards RS, et al. Arch Virol, 2014 Apr. PMID 24122155

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    RNA 1 polyprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_022798.1 Reference assembly

      Range
      108..7082
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_008802578.1 RNA 1 polyprotein [Potato black ringspot virus]

      See identical proteins and their annotated locations for YP_008802578.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      U5XIW8, U5XIZ2
      Conserved Domains (2) summary
      cd01699
      Location:1691 → 1989
      RNA_dep_RNAP; RNA_dep_RNAP: RNA-dependent RNA polymerase (RdRp) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage. RdRp catalyzes synthesis of the RNA strand complementary to a given RNA template. RdRps of many viruses are ...
      pfam00910
      Location:831 → 933
      RNA_helicase; RNA helicase
    Nucleotide Protein
    Heading Accession and Version

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