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    SIV1_gp1 nonstructural polyprotein [ Solenopsis invicta virus 1 ]

    Gene ID: 5130502, updated on 15-Aug-2018

    Summary

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    Gene symbol
    SIV1_gp1
    Gene description
    nonstructural polyprotein
    Locus tag
    SIV1_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Solenopsis invicta virus 1 (nat-host: Solenopsis invicta)
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Dicistroviridae; Aparavirus
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    Genomic context

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    Sequence:
    NC_006559.1 (28..4218)

    NC_006559.1Genomic Context describing neighboring genes Neighboring gene orf2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006559.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A picorna-like virus from the red imported fire ant, Solenopsis invicta: initial discovery, genome sequence, and characterization. Valles SM, et al. Virology, 2004 Oct 10. PMID 15380366

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    nonstructural polyprotein
    Names
    orf1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006559.1 Reference assembly

      Range
      28..4218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_164440.1 nonstructural polyprotein [Solenopsis invicta virus 1]

      See identical proteins and their annotated locations for YP_164440.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q5Y975
      Conserved Domains (3) summary
      pfam12381
      Location:728 → 843
      Peptidase_C3G; Tungro spherical virus-type peptidase
      cd01699
      Location:1029 → 1330
      RNA_dep_RNAP; RNA_dep_RNAP: RNA-dependent RNA polymerase (RdRp) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage. RdRp catalyzes synthesis of the RNA strand complementary to a given RNA template. RdRps of many viruses are ...
      pfam00910
      Location:30 → 145
      RNA_helicase; RNA helicase
    Nucleotide Protein
    Heading Accession and Version

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