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    M-Rep master rplication initiator protein [ Black medic leaf roll virus ]

    Gene ID: 18158300, updated on 6-May-2024

    Summary

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    Gene symbol
    M-Rep
    Gene description
    master rplication initiator protein
    Locus tag
    AA78_sRgp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Black medic leaf roll virus (isolate: Bjuv_153, acronym: BMLRV-[SE;153], nat-host: Pisum sativum)
    Lineage
    Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Mulpavirales; Nanoviridae; Nanovirus
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    Genomic context

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    Location:
    segment: DNA R
    Sequence:
    NC_023299.1 (1..1008)

    NC_023299.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_023299.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome diversity and evidence of recombination and reassortment in nanoviruses from Europe. Grigoras I, et al. J Gen Virol, 2014 May. PMID 24515973

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Miscellaneous features

    • Loc: 1002-1008, 1-2 conserved nonanucleotide at replication origin

    regulatory

    • Loc: 56-63 regulatory_class = TATA_box
    • Loc: 98-104 regulatory_class = polyA_signal_sequence

    stem_loop

    • Loc: 991-1008, 1-11

    General protein information

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    Preferred Names
    master rplication initiator protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_023299.1 Reference assembly

      Range
      1..1008
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_008997797.1 master rplication initiator protein [Black medic leaf roll virus]

      See identical proteins and their annotated locations for YP_008997797.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      V9TN84, V9TRN4
      Conserved Domains (2) summary
      pfam02407
      Location:5 → 82
      Viral_Rep; Putative viral replication protein
      cl21455
      Location:176 → 269
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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