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    hypothetical protein [ Dictyostelium discoideum AX4 ]

    Gene ID: 8621698, updated on 14-Nov-2024

    Summary

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    Official Full Name
    hypothetical protein
    Primary source
    dictyBase:DDB_G0278793
    Locus tag
    DDB_G0278793
    See related
    AmoebaDB:DDB_G0278793; VEuPathDB:DDB_G0278793
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
    Old locus tag
    DDBDRAFT_0206195; DDB_0206195
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_007089.4 (1186077..1187040)

    Chromosome 3 - NC_007089.4Genomic Context describing neighboring genes Neighboring gene heat shock protein DnaJ family protein Neighboring gene hypothetical protein Neighboring gene inositol phosphate kinase Neighboring gene sentrin-specific protease 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007089.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic suppression of a phosphomimic myosin II identifies system-level factors that promote myosin II cleavage furrow accumulation. Ren Y, et al. Mol Biol Cell, 2014 Dec 15. PMID 25318674, Free PMC Article
    2. Proteomic analysis of Legionella-containing phagosomes isolated from Dictyostelium. Shevchuk O, et al. Int J Med Microbiol, 2009 Nov. PMID 19482547
    3. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables microtubule binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cleavage furrow ingression IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within mitotic cytokinesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein localization to cleavage furrow IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in mitotic spindle pole IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in phagocytic vesicle HDA PubMed 
    is_active_in spindle microtubule IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007089.4 Reference assembly

      Range
      1186077..1187040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_636874.1 → XP_641966.1  hypothetical protein DDB_G0278793 [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_641966.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q54XR4
      Conserved Domains (2) summary
      TIGR02552
      Location:163 → 225
      LcrH_SycD; type III secretion low calcium response chaperone LcrH/SycD
      sd00006
      Location:180 → 210
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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