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    psmA2 [ Dictyostelium discoideum AX4 ]

    Gene ID: 8628525, updated on 22-Aug-2024

    Summary

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    Official Symbol
    psmA2
    Primary source
    dictyBase:DDB_G0292122
    Locus tag
    DDB_G0292122
    See related
    AmoebaDB:DDB_G0292122; VEuPathDB:DDB_G0292122
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
    Old locus tag
    DDBDRAFT_0184241; DDBDRAFT_0232935; DDB_0184241; DDB_0232935
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    3
    Sequence:
    Chromosome: 6; NC_007092.3 (1227398..1228417)

    Chromosome 6 - NC_007092.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene RING zinc finger-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007092.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteasomes from Dictyostelium discoideum: characterization of structure and function. Schauer TM, et al. J Struct Biol, 1993 Sep-Oct. PMID 8130037
    2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Process Evidence Code Pubs
    involved_in proteasomal protein catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in proteasomal protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of proteasome complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of proteasome core complex, alpha-subunit complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of proteasome core complex, alpha-subunit complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of proteasome core complex, alpha-subunit complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of proteasome core complex, alpha-subunit complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    20S proteasome subunit alpha-2
    Names
    proteasome subunit alpha type 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007092.3 Reference assembly

      Range
      1227398..1228417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_629843.1 → XP_629845.1  proteasome subunit alpha type 2 [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_629845.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q54DM7
      Conserved Domains (2) summary
      COG0638
      Location:3 → 229
      PRE1; 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones]
      cd03750
      Location:5 → 229
      proteasome_alpha_type_2; proteasome_alpha_type_2. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on ...
    Nucleotide Protein
    Heading Accession and Version

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