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    HELRODRAFT_191655 hypothetical protein [ Helobdella robusta ]

    Gene ID: 20212012, updated on 28-Dec-2023

    Summary

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    Gene symbol
    HELRODRAFT_191655
    Gene description
    hypothetical protein
    Locus tag
    HELRODRAFT_191655
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Helobdella robusta
    Lineage
    Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_008704216.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008704216.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into bilaterian evolution from three spiralian genomes. Simakov O, et al. Nature, 2013 Jan 24. PMID 23254933, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008704216.1 Reference assembly

      Range
      1130636..1133233 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009018951.1 → XP_009017199.1  hypothetical protein HELRODRAFT_191655 [Helobdella robusta]

      See identical proteins and their annotated locations for XP_009017199.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      T1FT65
      Conserved Domains (3) summary
      cd05819
      Location:412 → 644
      NHL; NHL repeat unit of beta-propeller proteins
      pfam00097
      Location:25 → 69
      zf-C3HC4; Zinc finger, C3HC4 type (RING finger)
      pfam00643
      Location:174 → 213
      zf-B_box; B-box zinc finger
    Nucleotide Protein
    Heading Accession and Version

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