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    LOC104847912 tripartite motif-containing protein 5 [ Fukomys damarensis (Damara mole-rat) ]

    Gene ID: 104847912, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC104847912
    Gene description
    tripartite motif-containing protein 5
    Locus tag
    H920_00012
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Fukomys damarensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC104847912 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022944695.1 (29..491)
    101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011025317.1 (29..491)

    NW_022944695.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DMR_v1.0_HiC Primary Assembly

    Genomic

    1. NW_022944695.1 Reference DMR_v1.0_HiC Primary Assembly

      Range
      29..491
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010603876.1 → XP_010602178.1  tripartite motif-containing protein 5

      UniProtKB/TrEMBL
      A0A091E740
      Conserved Domains (2) summary
      smart00336
      Location:88 → 128
      BBOX; B-Box-type zinc finger
      cd00162
      Location:14 → 62
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    Nucleotide Protein
    Heading Accession and Version

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