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    LOC103864979 josephin-like protein [ Brassica rapa (field mustard) ]

    Gene ID: 103864979, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103864979
    Gene description
    josephin-like protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103864979 in Genome Data Viewer
    Location:
    chromosome: A4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A04 NC_024798.2 (15878536..15879258)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A4 NC_024798.1 (13258200..13259018)

    Chromosome A04 - NC_024798.2Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit TIM10 Neighboring gene DNA-directed RNA polymerases I and III subunit RPAC2 Neighboring gene tubulin beta-7 chain Neighboring gene zinc finger CCCH domain-containing protein 25 Neighboring gene putative F-box protein At2g19630 Neighboring gene josephin-like protein Neighboring gene serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    josephin-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024798.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      15878536..15879258
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009142764.3 → XP_009141012.1  josephin-like protein

      See identical proteins and their annotated locations for XP_009141012.1

      UniProtKB/TrEMBL
      M4FFW6
      Conserved Domains (1) summary
      pfam02099
      Location:13 → 173
      Josephin; Josephin
    Nucleotide Protein
    Heading Accession and Version

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