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    TP29_gp3 replication-associated protein [ Trifolium-associated circular DNA virus 1 ]

    Gene ID: 22974523, updated on 16-Aug-2018

    Summary

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    Gene symbol
    TP29_gp3
    Gene description
    replication-associated protein
    Locus tag
    TP29_gp3
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trifolium-associated circular DNA virus 1 (isolate: TasCV-1_FR34-34-Cam, nat-host: Trifolium resupinatum)
    Lineage
    Viruses; ssDNA viruses; unclassified ssDNA viruses
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    Genomic context

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    Sequence:
    NC_026272.1 (1584..2687, complement)

    NC_026272.1Genomic Context describing neighboring genes Neighboring gene putative capsid protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_026272.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of novel Bromus- and Trifolium-associated circular DNA viruses. Kraberger S, et al. Arch Virol, 2015 May. PMID 25701210

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    replication-associated protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_026272.1 Reference assembly

      Range
      1584..2687 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009117064.1 replication-associated protein [Trifolium-associated circular DNA virus 1]

      See identical proteins and their annotated locations for YP_009117064.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0B4U8Q6
      Conserved Domains (2) summary
      pfam00799
      Location:37 → 136
      Gemini_AL1; Geminivirus Rep catalytic domain
      cl21455
      Location:225 → 274
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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