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    sugp2.L SURP and G-patch domain containing 2 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 734589, updated on 11-Apr-2024

    Summary

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    Official Symbol
    sugp2.L
    Official Full Name
    SURP and G-patch domain containing 2 L homeolog
    Primary source
    Xenbase:XB-GENE-866005
    Locus tag
    XELAEV_18006630mg
    See related
    EnsemblRapid:ENSXLAG00005035820
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    sugp2; sfrs14
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    Genomic context

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    See sugp2.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (123252029..123283281)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (110993858..111025158)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 161A L homeolog Neighboring gene solute carrier family 25 member 42 L homeolog Neighboring gene armadillo repeat containing 6 L homeolog Neighboring gene MICOS complex subunit MIC13 Neighboring gene hydroxysteroid (11-beta) dehydrogenase 1-like L homeolog # S to L

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC115540

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SURP and G-patch domain containing 2 L homeolog
    Names
    SURP and G patch domain containing 2
    SURP and G-patch domain-containing protein 2
    splicing factor, arginine/serine-rich 14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001096065.1 → NP_001089534.1  SURP and G-patch domain containing 2 L homeolog

      See identical proteins and their annotated locations for NP_001089534.1

      Status: PROVISIONAL

      Source sequence(s)
      BC097819
      UniProtKB/TrEMBL
      A0A974DZY7, Q4V7M9
      Related
      ENSXLAP00005107166.1, ENSXLAT00005109277.1
      Conserved Domains (1) summary
      pfam01805
      Location:709 → 756
      Surp; Surp module

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      123252029..123283281
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018250247.2 → XP_018105736.1  SURP and G-patch domain containing 2 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A974DZY7, Q4V7M9

    2. XM_018250256.2 → XP_018105745.1  SURP and G-patch domain containing 2 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A974DZY7, Q4V7M9
    Nucleotide Protein Strain
    Heading Accession and Version

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