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    TSPAN5 tetraspanin 5 [ Aotus nancymaae (Ma's night monkey) ]

    Gene ID: 105732624, updated on 19-Apr-2024

    Summary

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    Gene symbol
    TSPAN5
    Gene description
    tetraspanin 5
    See related
    Ensembl:ENSANAG00000036482
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aotus nancymaae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
    Orthologs
    human mouse all
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    Genomic context

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    See TSPAN5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988417.1 (91179317..91366319, complement)
    101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018508326.1 (659960..841414, complement)

    NW_026988417.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene Rap1 GTPase-GDP dissociation stimulator 1 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC105732634 Neighboring gene eukaryotic translation initiation factor 4E

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraspanin-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Genomic

    1. NW_026988417.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

      Range
      91179317..91366319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012474811.3 → XP_012330234.1  tetraspanin-5 isoform X1

      See identical proteins and their annotated locations for XP_012330234.1

      UniProtKB/TrEMBL
      A0A2K5EXV4
      Related
      ENSANAP00000038052.1
      Conserved Domains (2) summary
      cd03159
      Location:113 → 233
      TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:15 → 257
      Tetraspannin; Tetraspanin family

    2. XM_012474813.3 → XP_012330236.1  tetraspanin-5 isoform X4

      See identical proteins and their annotated locations for XP_012330236.1

      UniProtKB/TrEMBL
      A0A2K5EXT2
      Related
      ENSANAP00000038054.1
      Conserved Domains (1) summary
      cd03159
      Location:64 → 184
      TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

    3. XM_012474812.2 → XP_012330235.2  tetraspanin-5 isoform X2

    4. XM_064369453.1 → XP_064225523.1  tetraspanin-5 isoform X3

    5. XM_012474814.3 → XP_012330237.1  tetraspanin-5 isoform X5

      Conserved Domains (2) summary
      cd03159
      Location:113 → 208
      TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:14 → 187
      Tetraspannin; Tetraspanin family
    Nucleotide Protein
    Heading Accession and Version

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