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    POLR2J RNA polymerase II subunit J [ Bos taurus (cattle) ]

    Gene ID: 540428, updated on 4-Jun-2024

    Summary

    Gene symbol
    POLR2J
    Gene description
    RNA polymerase II subunit J
    See related
    BGD:BT28884; Ensembl:ENSBTAG00000005446
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    POLR2J2
    Orthologs
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    Genomic context

    See POLR2J in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (34576781..34581157)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene uroplakin 3B like 2 Neighboring gene RAS p21 protein activator 4B Neighboring gene leucine rich repeats and WD repeat domain containing 1 Neighboring gene alkB homolog 4, lysine demethylase

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC133490

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables RNA polymerase II activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    DNA-directed RNA polymerase II subunit RPB11
    Names
    DNA directed RNA polymerase II polypeptide J
    DNA directed RNA polymerase II polypeptide J-related
    DNA-directed RNA polymerase II subunit J
    RNA polymerase II subunit B11
    polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa
    NP_001032560.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037483.2NP_001032560.1  DNA-directed RNA polymerase II subunit RPB11

      See identical proteins and their annotated locations for NP_001032560.1

      Status: PROVISIONAL

      Source sequence(s)
      BC108226
      UniProtKB/Swiss-Prot
      Q32P79
      Related
      ENSBTAP00000101439.1, ENSBTAT00000099783.1
      Conserved Domains (1) summary
      cd06926
      Location:14105
      RNAP_II_RPB11; RPB11 subunit of Eukaryotic RNA polymerase II

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      34576781..34581157
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)