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    DAG1 dystroglycan 1 [ Condylura cristata (star-nosed mole) ]

    Gene ID: 101630794, updated on 8-Mar-2024

    Summary

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    Gene symbol
    DAG1
    Gene description
    dystroglycan 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Condylura cristata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
    Orthologs
    human mouse all
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    Genomic context

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    See DAG1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567105.1 (61275736..61323169, complement)

    NW_004567105.1Genomic Context describing neighboring genes Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene bassoon presynaptic cytomatrix protein Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene aminomethyltransferase Neighboring gene T cell leukemia translocation altered

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004567105.1 Unplaced Scaffold Reference ConCri1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables laminin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in morphogenesis of an epithelium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle attachment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nerve development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of dystroglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of dystrophin-associated glycoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dystroglycan

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ConCri1.0

    Genomic

    1. NW_004567105.1 Reference ConCri1.0

      Range
      61275736..61323169 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004676161.2 → XP_004676218.1  dystroglycan isoform X1

      See identical proteins and their annotated locations for XP_004676218.1

      Conserved Domains (3) summary
      cd11303
      Location:62 → 163
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:182 → 304
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:606 → 895
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    2. XM_012720395.1 → XP_012575849.1  dystroglycan isoform X1

      See identical proteins and their annotated locations for XP_012575849.1

      Conserved Domains (3) summary
      cd11303
      Location:62 → 163
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:182 → 304
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:606 → 895
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    3. XM_012720394.1 → XP_012575848.1  dystroglycan isoform X1

      See identical proteins and their annotated locations for XP_012575848.1

      Conserved Domains (3) summary
      cd11303
      Location:62 → 163
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:182 → 304
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:606 → 895
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    4. XM_012720396.1 → XP_012575850.1  dystroglycan isoform X1

      See identical proteins and their annotated locations for XP_012575850.1

      Conserved Domains (3) summary
      cd11303
      Location:62 → 163
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:182 → 304
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:606 → 895
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    5. XM_012720397.1 → XP_012575851.1  dystroglycan isoform X2

      Conserved Domains (3) summary
      cd11303
      Location:332 → 436
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:16 → 138
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:440 → 729
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    Nucleotide Protein
    Heading Accession and Version

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