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    E2F3 E2F transcription factor 3 [ Condylura cristata (star-nosed mole) ]

    Gene ID: 101634351, updated on 8-Mar-2024

    Summary

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    Gene symbol
    E2F3
    Gene description
    E2F transcription factor 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Condylura cristata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
    Orthologs
    human mouse all
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    Genomic context

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    See E2F3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567138.1 (6124394..6201608)

    NW_004567138.1Genomic Context describing neighboring genes Neighboring gene inhibitor of DNA binding 4, HLH protein Neighboring gene membrane bound O-acyltransferase domain containing 1 Neighboring gene uncharacterized LOC105854402 Neighboring gene CDK5 regulatory subunit associated protein 1 like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004567138.1 Unplaced Scaffold Reference ConCri1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor E2F3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ConCri1.0

    Genomic

    1. NW_004567138.1 Reference ConCri1.0

      Range
      6124394..6201608
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004693312.2 → XP_004693369.1  transcription factor E2F3 isoform X1

      Conserved Domains (2) summary
      cd14660
      Location:256 → 356
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:182 → 245
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain

    2. XM_012732962.1 → XP_012588416.1  transcription factor E2F3 isoform X2

      Conserved Domains (2) summary
      cd14660
      Location:129 → 229
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:55 → 118
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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