U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Snr1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [ Limulus polyphemus (Atlantic horseshoe crab) ]

    Gene ID: 106462447, updated on 2-Jul-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Snr1
    Gene description
    SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
    See related
    EnsemblRapid:LOC106462447
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Limulus polyphemus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Merostomata; Xiphosura; Limulidae; Limulus
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Snr1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Limulus_polyphemus-2.1.2 (GCF_000517525.1) Unplaced Scaffold NW_013666777.1 (159714..179546, complement)

    NW_013666777.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 132E-like Neighboring gene uncharacterized LOC106462446 Neighboring gene sodium-dependent serotonin transporter-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_013666777 Unplaced Scaffold Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Limulus polyphemus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Genomic

    1. NW_013666777.1 Reference Limulus_polyphemus-2.1.2 Primary Assembly

      Range
      159714..179546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013922368.2 → XP_013777822.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like

      Related
      XP_013777822.1, XM_013922368.2
      Conserved Domains (1) summary
      pfam04855
      Location:164 → 346
      SNF5; SNF5 / SMARCB1 / INI1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases