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    CLMN calmin [ Tupaia chinensis (Chinese tree shrew) ]

    Gene ID: 102472972, updated on 10-Mar-2024

    Summary

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    Gene symbol
    CLMN
    Gene description
    calmin
    Locus tag
    TREES_T100005833
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tupaia chinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See CLMN in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006203764.1 (1042089..1077508)

    NW_006203764.1Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing nuclear envelope family member 3 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC102492274 Neighboring gene dicer 1, ribonuclease III Neighboring gene BTB/POZ domain-containing protein KCTD3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006203764 Unplaced Scaffold Reference TupChi_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of meiotic nuclear membrane microtubule tethering complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calmin
    Names
    calmin (calponin-like, transmembrane)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TupChi_1.0

    Genomic

    1. NW_006203764.1 Reference TupChi_1.0

      Range
      1042089..1077508
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014582896.2 → XP_014438382.1  calmin isoform X1

      Conserved Domains (1) summary
      pfam00307
      Location:33 → 134
      CH; Calponin homology (CH) domain

    2. XM_014582897.2 → XP_014438383.1  calmin isoform X2

      Conserved Domains (1) summary
      pfam00307
      Location:33 → 134
      CH; Calponin homology (CH) domain
    Nucleotide Protein
    Heading Accession and Version

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