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    CDC42SE2 CDC42 small effector 2 [ Alligator mississippiensis (American alligator) ]

    Gene ID: 102572418, updated on 10-Mar-2024

    Summary

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    Gene symbol
    CDC42SE2
    Gene description
    CDC42 small effector 2
    Locus tag
    Y1Q_0012529
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator mississippiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
    Orthologs
    human mouse all
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    Genomic context

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    See CDC42SE2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current rAllMis1 (GCF_030867095.1) 3 NC_081826.1 (213235517..213356436, complement)
    102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713772.1 (9690724..9810853)

    Chromosome 3 - NC_081826.1Genomic Context describing neighboring genes Neighboring gene serine palmitoyltransferase long chain base subunit 1 Neighboring gene uncharacterized LOC109280800 Neighboring gene LYR motif containing 7 Neighboring gene histidine triad nucleotide binding protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of Rho protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CDC42 small effector protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAllMis1 Primary Assembly

    Genomic

    1. NC_081826.1 Reference rAllMis1 Primary Assembly

      Range
      213235517..213356436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014608799.3 → XP_014464285.1  CDC42 small effector protein 2

      Conserved Domains (1) summary
      cd00132
      Location:27 → 67
      CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

    2. XM_059724886.1 → XP_059580869.1  CDC42 small effector protein 2

    Nucleotide Protein
    Heading Accession and Version

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