U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    P483_33 DNA ligase [ Escherichia phage P483 ]

    Gene ID: 26627760, updated on 8-Jan-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    P483_33
    Gene description
    DNA ligase
    Locus tag
    P483_33
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia phage P483 (nat-host: Escherichia coli DE48)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Autographiviridae; Studiervirinae; Berlinvirus; Berlinvirus P483
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_028822.1 (29023..30105, complement)

    NC_028822.1Genomic Context describing neighboring genes Neighboring gene nucleotide kinase Neighboring gene BC10 family protein Neighboring gene hypothetical protein Neighboring gene dGTPase inhibitor; target for F exclusion Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_028822.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Isolation, genome sequencing and functional analysis of two T7-like coliphages of avian pathogenic Escherichia coli. Chen M, et al. Gene, 2016 May 10. PMID 26828615

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA ligase
    YP_009200615.1
    • DNA ligase, phage-associated

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_028822.1 Reference assembly

      Range
      29023..30105 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009200615.1 DNA ligase [Escherichia phage P483]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D3QHC9
      Conserved Domains (3) summary
      PHA00454
      Location:2 → 352
      PHA00454; ATP-dependent DNA ligase
      cl08424
      Location:328 → 346
      OBF_DNA_ligase_family; The Oligonucleotide/oligosaccharide binding (OB)-fold domain is a DNA-binding module that is part of the catalytic core unit of ATP dependent DNA ligases
      cl12015
      Location:9 → 249
      Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases