Hirundo rustica (ID 73420) - Genome

Hirundo rustica (Barn swallow)
Representative genome: Hirundo rustica (assembly bHirRus1.pri.v3)
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BLAST against Hirundo rustica genome, transcript, protein
All 4 genomes for species:
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ID: 73420

Organism Overview ; Genome Assembly and Annotation report [4]

Hirundo rustica (Barn swallow)

Hirundo rustica overview

Lineage: Eukaryota[15558]; Metazoa[7784]; Chordata[3583]; Craniata[3548]; Vertebrata[3548]; Euteleostomi[3503]; Archelosauria[1076]; Archosauria[1039]; Dinosauria[1034]; Saurischia[1034]; Theropoda[1034]; Coelurosauria[1034]; Aves[1034]; Neognathae[1009]; Passeriformes[350]; Sylvioidea[49]; Hirundinidae[4]; Hirundo[1]; Hirundo rustica[1]

Summary

Sequence data:

genome assemblies: 4; sequence reads: 1

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 1074.86

median protein count: 35006

median GC%: 42.25

NCBI Annotation Release:

101

Publications (limited to 20 most recent records)

Dense sampling of bird diversity increases power of comparative genomics. Feng S, et al. Nature 2020 Nov

Representative (genome information for reference and representative genomes)

Reference genome:

Hirundo rustica bHirRus1.pri.v3

Submitter: Vertebrate Genomes Project

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	1	NC_053450.1	CM026847.1	156.04	39.9	3,331	-	38	410	1,592	6

Chr	2	NC_053451.1	CM026848.1	119.02	40.4	2,921	-	21	423	1,388	6

Chr	3	NC_053452.1	CM026849.1	116.8	40.6	3,062	-	12	552	1,456	9

Chr	4	NC_053453.1	CM026850.1	76.19	40.9	2,319	-	8	261	1,024	9

Chr	5	NC_053454.1	CM026851.1	73.26	40.2	2,020	-	1	416	965	7

Chr	6	NC_053455.1	CM026852.1	63.26	41.8	2,468	-	7	339	1,096	7

Chr	7	NC_053456.1	CM026853.1	38.46	42.2	1,436	-	21	197	598	1

Chr	8	NC_053457.1	CM026854.1	36.09	42.9	1,508	-	2	208	615	-

Chr	9	NC_053458.1	CM026855.1	31.26	43.2	1,216	-	3	191	608	1

Chr	10	NC_053459.1	CM026856.1	25.88	44.1	1,116	37	7	186	550	3

Chr	11	NC_053460.1	CM026857.1	21.49	43.9	800	-	13	121	446	2

Chr	12	NC_053461.1	CM026858.1	20.89	45.0	886	-	1	159	416	1

Chr	13	NC_053462.1	CM026859.1	20.27	44.1	925	-	8	120	451	1

Chr	14	NC_053463.1	CM026860.1	18.81	46.3	748	-	-	56	401	10

Chr	15	NC_053464.1	CM026861.1	16.54	46.5	877	-	4	75	431	1

Chr	16	NC_053465.1	CM026862.1	15.28	47.9	707	-	2	67	367	1

Chr	17	NC_053466.1	CM026863.1	13.99	47.7	818	-	5	97	393	1

Chr	18	NC_053467.1	CM026864.1	12.07	48.4	648	-	8	70	346	-

Chr	19	NC_053468.1	CM026865.1	11.38	48.6	723	-	2	92	368	1

Chr	20	NC_053469.1	CM026866.1	11.19	49.8	724	-	2	62	319	-

Chr	21	NC_053470.1	CM026867.1	9.62	46.4	523	-	2	86	232	1

Chr	22	NC_053471.1	CM026868.1	7.51	49.8	506	-	-	25	251	-

Chr	23	NC_053472.1	CM026869.1	7.1	51.3	373	-	-	52	201	-

Chr	24	NC_053473.1	CM026870.1	6.84	53.5	578	-	2	29	275	-

Chr	25	NC_053474.1	CM026871.1	6.78	53.6	448	-	-	54	261	-

Chr	26	NC_053475.1	CM026872.1	5.55	54.0	493	-	4	24	278	1

Chr	27	NC_053476.1	CM026873.1	5.24	53.5	487	-	13	14	331	19

Chr	28	NC_053477.1	CM026874.1	5.3	52.3	339	-	1	35	183	2

Chr	29	NC_053478.1	CM026875.1	2.1	57.4	336	-	2	19	213	-

Chr	30	NC_053479.1	CM026876.1	1.65	58.6	191	-	-	7	127	-

Chr	31	NC_053480.1	CM026877.1	1.59	48.7	46	-	-	6	52	9

Chr	32	NC_053481.1	CM026878.1	0.78	51.2	27	-	-	6	29	8

Chr	33	NC_053482.1	CM026879.1	0.44	51.8	24	-	-	-	20	1

Chr	34	NC_053483.1	CM026880.1	0.61	49.4	8	-	-	2	17	7

Chr	35	NC_053484.1	CM026881.1	0.52	55.9	51	-	-	-	33	-

Chr	36	NC_053485.1	CM026882.1	0.34	60.6	64	-	15	10	63	-

Chr	37	NC_053486.1	CM026883.1	0.28	55.4	12	-	-	14	20	-

Chr	W	NC_053487.1	CM026884.1	31.7	46.0	329	-	3	55	218	37

Chr	38	NC_080708.1	CM037478.1	0.22	62.5	26	-	-	1	21	-

Chr	Z	NC_053488.1	CM026885.1	90.13	41.2	1,890	-	1	159	892	18

Chr	39	NC_080709.1	CM037479.1	0.07	66.3	6	-	-	-	7	-

Un	-	.	-	23.42	50.1	945	-	-	233	855	50

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Summary

Publications (limited to 20 most recent records)

Representative (genome information for reference and representative genomes)

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