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Platform GPL10871 Query DataSets for GPL10871
Status Public on Sep 02, 2010
Title Adelaide Microarray Facility CompuGen OligoLibrary Mouse 22k V2.1
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Mus musculus
Manufacturer Adelaide Microarray Facility, University of Adelaide, Australia
Manufacture protocol CompuGen Mouse OligoLibrary V2.0 comprising 21,991 65-mers representing 21,587 unique genes. Additional locally made control plate spotted. Spots printed onto Corning CMT-GAPS slides using a 4x16 pinhead robot. Each print head printed an array of 480 spots arranged as a 24 rows by 20 columns (23040 features per array). This spotting layout is version 2.1. See www.microarray.adelaide.edu.au for printing details.
Coating CMT-GAPS
 
 
Submission date Aug 31, 2010
Last update date Sep 02, 2010
Contact name Renee Rogers
E-mail(s) r.rogers@garvan.org.au
Organization name Garvan Institute of Medical Research
Street address 384 Victoria Street
City Darlinghurst
State/province NSW
ZIP/Postal code 2010
Country Australia
 
Samples (30) GSM589666, GSM589667, GSM589668, GSM589669, GSM589670, GSM589671 
Series (1)
GSE23373 Transcript Profiling of Elf5+/- Mammary Glands During Pregnancy Identifies Novel Targets of Elf5

Data table header descriptions
ID
GB_ACC GenBank and RefSeq accessions
Common_Name Gene name
Gene_Symbol Official gene symbol
Description GenBank description
Entrez_Gene_ID Entrez Gene identifier
GO_biological_process Gene ontology annotations - biological process
GO_cellular_component Gene ontology annotations - cellular component
GO_molecular_function Gene ontology annotations - molecular function
Product Protein produced from gene sequence
PubMedID Unique identifiers for journal articles in the PubMed database
GenBank GenBank accession
REFSEQ NCBI Reference Sequence accession
UniGene UniGene cluster ID
SPOT_ID

Data table
ID GB_ACC Common_Name Gene_Symbol Description Entrez_Gene_ID GO_biological_process GO_cellular_component GO_molecular_function Product PubMedID GenBank REFSEQ UniGene SPOT_ID
AB000121 AB000121 Psmc3ip Psmc3ip Proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein 19183 cytosol proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein 16141073, 16141072, 15834424, 15192114, 12477932, 12466851, 11217851, 11076861, 11042159, 10806355, 10725249, 10349636, 9345291 AB000121 NM_008949
AB000490 AB000490 Nr5a1 Nr5a1 Nuclear receptor subfamily 5, group A, member 1 26423 luteinization; male gonad development; positive regulation of transcription from Pol II promoter; regulation of transcription, DNA-dependent nucleus DNA binding; ligand-dependent nuclear receptor activity; protein binding; steroid hormone receptor activity; transcription factor activity; transcriptional activator activity nuclear receptor subfamily 5, group A, member 1 16353668, 16176945, 16141073, 16141072, 16003771, 15994202, 15961510, 15944199, 15944188, 15937924, 15899914, 15829514, 15769848, 15767781, 15761027, 15737622, 15733675, 15713642, 15707893, 15666836, 15666831, 15618518, 15590666, 15579738, 15533830, 15307147, 15289436, 15229180, 15211353, 15192092, 15192080, 15118069, 15056615, 15026179, 15003627, 14726490, 14678822, 14645112, 14595835, 12972182, 12949260, 12920232, 12917325, 12861022, 12851310, 12835383, 12732652, 12732619, 12730328, 12727442, 12719432, 12697720, 12651892, 12610109, 12538527, 12530657, 12530656, 12482977, 12466851, 12456803, 12360237, 12351700, 12242296, 12239114, 12223418, 12183375, 12130543, 12050120, 11932209, 11923473, 11923472, 11875113, 11861512, 11830575, 11807026, 11796523, 11796516, 11738791, 11738790, 11602358, 11420609, 11416865, 11287187, 11217851, 11124111, 11121051, 11076861, 11071856, 11042159, 10963870, 10949085, 10880989, 10706291, 10675033, 10654601, 10650968, 10588871, 10588713, 10478838, 10446902, 10418976, 10367888, 10349636, 10319325, 10319323, 10230405, 10219237, 10029587, 9922094, 9879712, 9843206, 9843195, 9751506, 9121493, 9013759, 8938589, 8806624, 8668203, 8563022, 8544843, 8543574, 8413309, 8205615, 8187173, 8058073, 7958897, 7789992, 7706291, 7588219, 7490110, 7479914, 7476982, 1545809, 1406703 AB000490 NM_139051
AB001423 AB001423 Kif16b Kinesin family member 16B microtubule-based process kinesin complex; microtubule associated complex ATP binding; microtubule motor activity KIF16B AB001423
AB001424 AB001424 Kif17 Kif17 Kinesin family member 17 16559 microtubule-based movement; microtubule-based process; protein transport; vesicle-mediated transport kinesin complex; microtubule associated complex ATP binding; microtubule motor activity; protein binding kinesin family member 17 16002395, 14673085, 12693553, 12493914, 12466851, 12391294, 11416179, 11389829, 11217851, 11076861, 11042159, 10846156, 10349636, 9275178, 8889548, 7514534 AB001424 NM_010623
AB001425 AB001425 Kif16a Kinesin family member 16A microtubule-based process kinesin complex; microtubule associated complex ATP binding; microtubule motor activity motor domain of KIF16A AB001425
AB001426 AB001426 Cenpe Cenpe Centromere protein E 229841 attachment of spindle microtubules to kinetochore chromosome, pericentric region; kinetochore; microtubule associated complex ATP binding; microtubule motor activity centromere protein E 16141073, 16141072, 15226446, 12925705, 12477932, 12466851, 12361599, 12355205, 12147697, 12068923, 11416179, 11217851, 11084331, 11076861, 11042159, 10349636, 9925740, 9763662, 9275178, 8889548, 7514534 AB001426 NM_173762
AB001428 AB001428 Kif12 Kif12 Kinesin family member 12 16552 microtubule-based movement; microtubule-based process kinesin complex; microtubule associated complex ATP binding; microtubule motor activity kinesin family member 12 15728779, 12833159, 12477932, 12466851, 11416179, 11217851, 11125038, 11076861, 11042159, 10349636, 9275178, 7514534 AB001428 NM_010616
AB001430 AB001430 Kif13b Kinesin family member 13B microtubule-based process kinesin complex ATP binding; microtubule motor activity motor domain of KIF13B AB001430
AB001431 AB001431 Kif14 Kinesin family member 14 microtubule-based process kinesin complex; microtubule associated complex ATP binding; microtubule motor activity motor domain of KIF14 AB001431
AB001432 AB001432 Knsl7 Kif15 Kinesin-like 7 209737 microtubule-based process kinesin complex; microtubule associated complex ATP binding; hydrolase activity; microtubule motor activity kinesin-like 7 16141073, 16141072, 15226823, 14618103, 12477932, 12466851, 11416179, 11217851, 11076861, 11042159, 10349636, 9275178, 7514534 AB001432 NM_010620
AB001434 AB001434 Kif6 Kif6 Kinesin family member 6 319991 microtubule-based process kinesin complex ATP binding; microtubule motor activity kinesin family member 6 12466851, 11217851, 11076861, 11042159, 10349636, 9275178, 7514534 AB001434 NM_177052
AB001435 AB001435 Kif7 Kinesin family member 7 microtubule-based process kinesin complex ATP binding; microtubule motor activity motor domain of KIF7 AB001435
AB001436 AB001436 Kif8 Mus musculus mRNA for motor domain of KIF8, partial cds. microtubule-based process kinesin complex; microtubule associated complex ATP binding; microtubule motor activity motor domain of KIF8 AB001436
AB001456 AB001456 Kif1c Kif1c Kinesin family member 1C 16562 microtubule-based movement; microtubule-based process; retrograde transport, Golgi to ER Golgi apparatus; kinesin complex; microtubule associated complex ATP binding; microtubule motor activity kinesin family member 1C 16141073, 16141072, 15368895, 12477932, 12466851, 11784862, 11591317, 11416179, 11318612, 11217851, 11076861, 11042159, 10349636, 9720874, 9371744, 9275178, 8889548 AB001456 NM_153103
AB001457 AB001457 Kifc3 Kifc3 Katanin p80 (WD40-containing) subunit B 1 16582 Golgi organization and biogenesis; microtubule-based movement; microtubule-based process Golgi apparatus; kinesin complex; microtubule associated complex ATP binding; microtubule motor activity; minus-end-directed microtubule motor activity kinesin family member C3 16141073, 16141072, 14645204, 12477932, 12466851, 12135985, 11217851, 11154264, 11076861, 11042159, 10349636, 10226653, 9339368, 9275178, 8889548 AB001457 NM_010631
AB001737 AB001737 Igk-V8 Immunoglobulin kappa chain variable 8 (V8) anti-CEA scFv antibody AB001737
AB001738 AB001738 Similar to [Human Ig rearranged gamma chain mRNA, V-J-C region and complete cds.], gene product scFv collagenase IV antibody AB001738
AB002663 AB002663 Ncf1 Ncf1 Neutrophil cytosolic factor 1 17969 NADP catabolism; cell proliferation; cellular defense response (sensu Vertebrata); electron transport; inflammatory response; intracellular signaling cascade; leukotriene metabolism; response to bacteria cytosol superoxide-generating NADPH oxidase activity neutrophil cytosolic factor 1 16141073, 16141072, 16127156, 16109921, 16041040, 15936744, 15908387, 15850784, 15743827, 15670768, 15557642, 15513930, 15501800, 15501765, 15310853, 15258578, 15170228, 15123520, 15033459, 14993144, 14734763, 14507659, 12958309, 12868577, 12688546, 12560337, 12496167, 12477932, 12466851, 12364355, 12031896, 11937554, 11867678, 11779826, 11733538, 11729200, 11705910, 11217851, 11156938, 11076861, 11042159, 11013070, 10987289, 10891396, 10678931, 10670582, 10647999, 10447107, 10433265, 10349636, 10330122, 10085000, 9494100, 9490028, 9324362, 9116268, 8889551, 8889548, 8119734, 7650482, 2393022 AB002663 NM_010876
AB003502 AB003502 Gspt1 Gspt1 G1 to S phase transition 1 14852 G1/S transition of mitotic cell cycle; cell proliferation; protein biosynthesis; regulation of cell cycle; translational elongation GO:5634(nucleus) GTP binding; GTPase activity; translation elongation factor activity G1 to S phase transition 1 16141073, 16141072, 12477932, 12466851, 11217851, 11076861, 11042159, 10725249, 10349636, 9712840, 7842732, 2511002 AB003502 NM_146066
AB005457 AB005457 Hoxa9 Hoxa9 Homeo box A9 15405 development; organogenesis; pattern specification; regulation of transcription, DNA-dependent cytoplasm; nucleus; transcription factor complex DNA binding; protein binding; transcription factor activity; transcriptional activator activity homeobox protein A9 16015334, 15680324, 15618518, 15254242, 15161102, 15087118, 15082777, 15070702, 15042701, 14701735, 14615372, 12923056, 12714971, 12477932, 12082612, 12032333, 10591139, 10454582, 10354475, 10328847, 9892669, 9657735, 9639506, 9524228, 9408238, 9367423, 9343407, 9291463, 9058712, 9013929, 8950991, 8833244, 8625797, 8563752, 8099712, 7862151, 7768176, 7667266, 2891029, 1358459 AB005457 NM_010456

Total number of rows: 21781

Table truncated, full table size 6704 Kbytes.




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