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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 15, 2006 |
| Title |
STMSTY1 |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Salmonella enterica subsp. enterica serovar Typhimurium |
| Manufacturer |
Tina,,Boussard; School of Medicine, Department of Genetics, Stanford, CA, United States, 94305; 650-736-0077; boussard@genome.stanford.edu |
| Manufacture protocol |
Material is transferred from microtiter plate wells to the slide surface by an automated print head
|
| Support |
glass |
| Coating |
unknown_surface_type |
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| |
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| Submission date |
Mar 13, 2006 |
| Last update date |
May 05, 2008 |
| Organization |
Stanford Microarray Database (SMD) |
| E-mail(s) |
array@genome.stanford.edu
|
| Phone |
650-498-6012
|
| URL |
http://genome-www5.stanford.edu/
|
| Department |
Stanford University, School of Medicine
|
| Street address |
300 Pasteur Drive
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
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| Samples (29)
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GSM100293, GSM100294, GSM100295, GSM100296, GSM100297, GSM100298
GSM100299, GSM100300, GSM100301, GSM100302, GSM100303, GSM100304, GSM100305, GSM100306, GSM100307, GSM100308, GSM100309, GSM100310, GSM100311, GSM100312, GSM100313, GSM100314, GSM100315, GSM100316, GSM100317, GSM100318, GSM100319, GSM100320, GSM100321
|
| Series (1) |
| GSE4461 |
Genome-wide screen for salmonella genes required for long-term systemic infection of the mouse. |
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| Data table header descriptions |
| ID |
|
| METACOLUMN |
|
| METAROW |
|
| COLUMN |
|
| ROW |
|
| ORF |
|
| CONTROL |
|
| SEQUENCE DESCRIPTION |
|
| POLYMER |
|
| TYPE |
|
| SPOT_ID |
|
| Data table |
| ID |
METACOLUMN |
METAROW |
COLUMN |
ROW |
ORF |
CONTROL |
SEQUENCE DESCRIPTION |
POLYMER |
TYPE |
SPOT_ID |
| 1 |
1 |
1 |
1 |
1 |
SCUT2001 |
|
nitrite:nitrate antiporter (TC 2.A.1.8.1) (narU [Salmonella typhimurium]) |
DNA |
ORF |
|
| 2 |
1 |
1 |
2 |
1 |
SCUT1965 |
|
|
DNA |
ORF |
|
| 3 |
1 |
1 |
3 |
1 |
SCUT2003 |
|
hypothetical protein (ygcF [Escherichia coli]) |
DNA |
ORF |
|
| 4 |
1 |
1 |
4 |
1 |
SCUT1956 |
|
replication gene A (gpA [Bacteriophage P2]) |
DNA |
ORF |
|
| 5 |
1 |
1 |
5 |
1 |
SCUT1976 |
|
polynucleotide phosphorylase (EC 2.7.7.8) (pnp [Escherichia coli]) |
DNA |
ORF |
|
| 6 |
1 |
1 |
6 |
1 |
SCUT1957 |
|
ferric enterobactin transporter, outer membrane subunit (fepA [Escherichia coli]) |
DNA |
ORF |
|
| 7 |
1 |
1 |
7 |
1 |
SCUT1972 |
|
osmotically inducible transcriptional activator (osmE [Escherichia coli]) |
DNA |
ORF |
|
| 8 |
1 |
1 |
8 |
1 |
SCUT1966 |
|
hypothetical oxidoreductase (ykgC [Escherichia coli]) |
DNA |
ORF |
|
| 9 |
1 |
1 |
9 |
1 |
SCUT1936 |
|
colicin V production membrane protein (cvpA [Escherichia coli]) |
DNA |
ORF |
|
| 10 |
1 |
1 |
10 |
1 |
SCUT1968 |
|
|
DNA |
ORF |
|
| 11 |
1 |
1 |
11 |
1 |
SCUT1929 |
|
amino acid ABC transporter, ATP-binding subunit [Escherichia coli] |
DNA |
ORF |
|
| 12 |
1 |
1 |
12 |
1 |
SCUT2004 |
|
|
DNA |
ORF |
|
| 13 |
1 |
1 |
13 |
1 |
SCUT2320 |
|
2-dehydro-3-deoxyphosphooctonate aldolase (EC 4.1.2.16) (kdsA [Escherichia coli]) |
DNA |
ORF |
|
| 14 |
1 |
1 |
14 |
1 |
SCUT2378 |
|
|
DNA |
ORF |
|
| 15 |
1 |
1 |
15 |
1 |
SCUT2344 |
|
nickel-responsibe transcriptional regulator of the nik operon (nikR [Escherichia coli]) |
DNA |
ORF |
|
| 16 |
1 |
1 |
1 |
2 |
SCUT2385 |
|
|
DNA |
ORF |
|
| 17 |
1 |
1 |
2 |
2 |
SCUT2310 |
|
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (mao2 [Salmonella typhimurium]) |
DNA |
ORF |
|
| 18 |
1 |
1 |
3 |
2 |
SCUT2343 |
|
propanediol diffusion facilitator (pduF [Salmonella typhimurium]) |
DNA |
ORF |
|
| 19 |
1 |
1 |
4 |
2 |
SCUT2361 |
|
D-amino acid dehydrogenase (dadA [Escherichia coli]) |
DNA |
ORF |
|
| 20 |
1 |
1 |
5 |
2 |
SCUT2342 |
|
SecY-interacting protein (syd [Escherichia coli]) |
DNA |
ORF |
|
Total number of rows: 6528
Table truncated, full table size 489 Kbytes.
| Supplementary data files not provided |
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