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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 17, 2008 |
| Title |
Sentrix HumanRef-8 v2 Expression BeadChip |
| Technology type |
oligonucleotide beads |
| Distribution |
commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Illumina Inc. |
| Manufacture protocol |
http://www.illumina.com/pages.ilmn?ID=9
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| Submission date |
Apr 18, 2007 |
| Last update date |
Feb 10, 2009 |
| Contact name |
GEO admin |
| E-mail(s) |
geo@ncbi.nlm.nih.gov
|
| Organization name |
NCBI/NLM/NIH
|
| Street address |
9000 Rockville Pike
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
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| Samples (630)
|
GSM182938, GSM182939, GSM182940, GSM182941, GSM182942, GSM182943
GSM182944, GSM182945, GSM182946, GSM182947, GSM182948, GSM182949, GSM182950, GSM182951, GSM182952, GSM182953, GSM182954, GSM182955, GSM182956, GSM182957, GSM182958, GSM182959, GSM182960, GSM182961, GSM182962, GSM182963, GSM182964, GSM182965, GSM182966, GSM182967, GSM182968, GSM182969, GSM182970, GSM182971, GSM182972, GSM182973, GSM182974, GSM182975, GSM182976, GSM182977, GSM182978, GSM182979, GSM182980, GSM182981, GSM182982, GSM182983, GSM182984, GSM182985, GSM182986, GSM182987, GSM182988, GSM182989, GSM182990, GSM182991, GSM182992, GSM182993, GSM182994, GSM182995, GSM182996, GSM182997, GSM182998, GSM182999, GSM183000, GSM183001, GSM183002, GSM183003, GSM183004, GSM183005, GSM183006, GSM183007, GSM183008, GSM183009, GSM183010, GSM183011, GSM183012, GSM183013, GSM183014, GSM183015, GSM183016, GSM183017, GSM183018, GSM183019, GSM183020, GSM183021, GSM183022, GSM183023, GSM183024, GSM183025, GSM183026, GSM183027, GSM183028, GSM183029, GSM183030, GSM183031, GSM183032, GSM183033, GSM183034, GSM183035, GSM183036, GSM183037, GSM183038, GSM183039, GSM183040, GSM183041, GSM183042, GSM183043, GSM183044, GSM183045, GSM183046, GSM183047, GSM183048, GSM183049, GSM183050, GSM183051, GSM183052, GSM183053, GSM183054, GSM183055, GSM183056, GSM183057, GSM183058, GSM183059, GSM183060, GSM183061, GSM183062, GSM183063, GSM183064, GSM183065, GSM183066, GSM183067, GSM183068, GSM183069, GSM183070, GSM183071, GSM183072, GSM183073, GSM183074, GSM183075, GSM183076, GSM183077, GSM183078, GSM183079, GSM183080, GSM183081, GSM183082, GSM183083, GSM183084, GSM183085, GSM183086, GSM183087, GSM183088, GSM183089, GSM183090, GSM183091, GSM183092, GSM183093, GSM183094, GSM183095, GSM183096, GSM183097, GSM183098, GSM183099, GSM183100, GSM183101, GSM183102, GSM183103, GSM183104, GSM183105, GSM183106, GSM183107, GSM183108, GSM183109, GSM183110, GSM183111, GSM183112, GSM183113, GSM183114, GSM183115, GSM183116, GSM183117, GSM183118, GSM183119, GSM183120, GSM183121, GSM183122, GSM183123, GSM183124, GSM183125, GSM183126, GSM307166, GSM307167, GSM307168, GSM307169, GSM307170, GSM307171, GSM307172, GSM307173, GSM335353, GSM335371, GSM335372, GSM335373, GSM335374, GSM335375, GSM335376, GSM335377, GSM335378, GSM335379, GSM335380, GSM335381, GSM335382, GSM335383, GSM335384, GSM335385, GSM335386, GSM335387, GSM335388, GSM335389, GSM369274, GSM369275, GSM369276, GSM369277, GSM369278, GSM369279, GSM369280, GSM369281, GSM369282, GSM369283, GSM369284, GSM369285, GSM369286, GSM369287, GSM369288, GSM369289, GSM369290, GSM369291, GSM369292, GSM369293, GSM369294, GSM369295, GSM369296, GSM369297, GSM375668, GSM375669, GSM375670, GSM375671, GSM375672, GSM375673, GSM375674, GSM402885, GSM402886, GSM402887, GSM402888, GSM406367, GSM406368, GSM406369, GSM406370, GSM406371, GSM406372, GSM406373, GSM406374, GSM406375, GSM406376, GSM406377, GSM406378, GSM406379, GSM406380, GSM406381, GSM406382, GSM406383, GSM406384, GSM406385, GSM406386, GSM406387, GSM406388, GSM406389, GSM406390, GSM410596, GSM410597, GSM410598, GSM410599, GSM410600, GSM410601, GSM410602, GSM410603, GSM410604, GSM410605, GSM410606, GSM410607, GSM410608, GSM410609, GSM410610, GSM410611, GSM444792, GSM444793, GSM444794, GSM444795, GSM453305, GSM453306, GSM453307, GSM453308, GSM453309, GSM453310, GSM453311, GSM453312, GSM453313, GSM453314, GSM453315, GSM453316, GSM453605, GSM453606, GSM453607, GSM453608, GSM453609, GSM453610, GSM453611, GSM453612, GSM453613, GSM453614, GSM453616, GSM453617, GSM453618, GSM453619, GSM453620, GSM453621, GSM453622, GSM453623, GSM453624, GSM453625, GSM453626, GSM453627, GSM453628, GSM453629, GSM471284, GSM471285, GSM471286, GSM471287, GSM471288, GSM471289, GSM471290, GSM471291, GSM471292, GSM471293, GSM471294, GSM471295, GSM471296, GSM471297, GSM471298, GSM471299, GSM471300, GSM471301, GSM471302, GSM471303, GSM471304, GSM563265, GSM563266, GSM563267, GSM563269, GSM563270, GSM563271, GSM563272, GSM563274, GSM563275, GSM563276, GSM563277, GSM563279, GSM563280, GSM563281, GSM563282, GSM563283, GSM563284, GSM563285, GSM563286, GSM563287, GSM563288, GSM563289, GSM563290, GSM563291, GSM563292, GSM563293, GSM563294, GSM563295, GSM563296, GSM563297, GSM563298, GSM563299, GSM563300, GSM563301, GSM563302, GSM563303, GSM563304, GSM681105, GSM681106, GSM681107, GSM681108, GSM681109, GSM681110, GSM681111, GSM681112, GSM681113, GSM681114, GSM681115, GSM681116, GSM681117, GSM681118, GSM681119, GSM681120, GSM681121, GSM681122, GSM681123, GSM681124, GSM681125, GSM681126, GSM681127, GSM681128, GSM681129, GSM681130, GSM681131, GSM681132, GSM681133, GSM681134, GSM681135, GSM681136, GSM681137, GSM681138, GSM681139, GSM681140, GSM681141, GSM681142, GSM681143, GSM681144, GSM681145, GSM681146, GSM681147, GSM681148, GSM681149, GSM681150, GSM681151, GSM681152, GSM681153, GSM681154, GSM681155, GSM681156, GSM681157, GSM681158, GSM681159, GSM681160, GSM681161, GSM681162, GSM681163, GSM681164, GSM681165, GSM681166, GSM681167, GSM681168, GSM681169, GSM681170, GSM681171, GSM681172, GSM681173, GSM681174, GSM681175, GSM681176, GSM681177, GSM681178, GSM681179, GSM681180, GSM681181, GSM681182, GSM681183, GSM681184, GSM681185, GSM681186, GSM681187, GSM681188, GSM681189, GSM681190, GSM681191, GSM681192, GSM681193, GSM681194, GSM681195, GSM681196, GSM681197, GSM681198, GSM681199, GSM681200, GSM681201, GSM681202, GSM681203, GSM681204, GSM681205, GSM681206, GSM681207, GSM681208, GSM681209, GSM681210, GSM681211, GSM681212, GSM681213, GSM681214...
Accession list truncated, click here to browse through all related public accessions
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|
| Series (15)
|
| GSE7547 |
Circulating Cells in Coronary Collateral Artery Growth |
| GSE12213 |
Human cholangiocarcinoma cells treated with Clonorchis sinensis excretory-secretory products. |
| GSE13290 |
Circulating Cells in Coronary Collateral Artery Growth II |
| GSE14787 |
microRNA-125b Promotes Neuronal Differentiation in Human Cells by Repressing Multiple Targets |
| GSE15038 |
Identification of novel transcriptional regulators involved in differentiation and function of monocyte and macropahge |
| GSE16099 |
Effect of hypoxia on gene expression by human macrophages |
| GSE16186 |
Gene expression profiles of human mesenchymal stem cells stimulated with canonical Wnt signaling |
| GSE16349 |
Transcriptomics evaluation of hexavalent chromium toxicity in human dermal fibroblasts |
| GSE17828 |
Control HepG2 vs miR-24 HepG2 cells |
| GSE18142 |
Human-specific transcriptional regulation of CNS development genes by FOXP2 |
| GSE19043 |
Integrative ‘omic’ approaches identify a Ras/PI3K signature sustaining addiction to the MET oncogene |
| GSE27557 |
Genome-wide gene expression analysis of 16HBE14 human bronchial epithelial cells in response to Neisseria |
| GSE27930 |
EVALUATION IN A MOUSE PROSTATE CANCER XENOGRAFT MODEL OF THE EFFECTIVENESS OF CYCLOPHOSPHAMIDE METRONOMIC REGIMEN |
| GSE29508 |
Alterations in skeletal muscle mRNA profile by angiopoietin-1 and angiopoietin-2 |
| GSE32089 |
Gene Expression Profile for the identification of miR-126 targets |
|
| Relations |
| Alternative to |
GPL6104 (official) |
| Data table header descriptions |
| ID |
Unique Illumina target identifier |
| GB_ACC |
Refseq mRNA accession number |
| SYMBOL |
Gene Symbol |
| DEFINITION |
Gene Description |
| ONTOLOGY |
Gene Ontology Categories |
| SYNONYM |
Alternative gene names |
| Data table |
| ID |
GB_ACC |
SYMBOL |
DEFINITION |
ONTOLOGY |
SYNONYM |
| ILMN_10000 |
NM_007112.3 |
THBS3 |
Homo sapiens thrombospondin 3 (THBS3), mRNA. |
cell-matrix adhesion [goid 7160] [pmid 8468055] [evidence TAS]; cell motility [goid 6928] [evidence NR ]; calcium ion binding [goid 5509] [pmid 8288588] [evidence TAS]; structural molecule activity [goid 5198] [evidence IEA]; protein binding [goid 5515] [evidence IEA]; heparin binding [goid 8201] [evidence NR ]; extracellular matrix (sensu Metazoa) [goid 5578] [evidence NR ] |
TSP3 |
| ILMN_10001 |
NM_018976.3 |
SLC38A2 |
Homo sapiens solute carrier family 38, member 2 (SLC38A2), mRNA. |
transport [goid 6810] [evidence IEA]; amino acid transport [goid 6865] [evidence IEA]; amino acid-polyamine transporter activity [goid 5279] [evidence IEA]; membrane [goid 16020] [evidence IEA] |
ATA2; SAT2; SNAT2; PRO1068; KIAA1382 |
| ILMN_10002 |
NM_175569.1 |
XG |
Homo sapiens Xg blood group (XG), mRNA. |
biological process unknown [goid 4] [evidence ND ]; molecular function unknown [goid 5554] [pmid 8054981] [evidence ND ]; membrane [goid 16020] [evidence NAS]; integral to membrane [goid 16021] [evidence IEA] |
PBDX; MGC118758; MGC118759; MGC118760; MGC118761 |
| ILMN_10004 |
NM_001954.3 |
DDR1 |
Homo sapiens discoidin domain receptor family, member 1 (DDR1), transcript variant 2, mRNA. |
cell adhesion [goid 7155] [pmid 8302582] [evidence TAS]; transmembrane receptor protein tyrosine kinase signaling pathway [goid 7169] [evidence IEA]; protein amino acid phosphorylation [goid 6468] [evidence IEA]; nucleotide binding [goid 166] [evidence IEA]; transmembrane receptor protein tyrosine kinase activity [goid 4714] [pmid 9659899] [evidence TAS]; receptor activity [goid 4872] [evidence IEA]; transferase activity [goid 16740] [evidence IEA]; ATP binding [goid 5524] [evidence IEA]; protein-tyrosine kinase activity [goid 4713] [evidence IEA]; membrane [goid 16020] [evidence IEA]; integral to plasma membrane [goid 5887] [pmid 8390675] [evidence TAS] |
CAK; DDR; NEP; PTK3; RTK6; TRKE; CD167; EDDR1; MCK10; NTRK4; PTK3A |
| ILMN_10005 |
NM_031966.2 |
CCNB1 |
Homo sapiens cyclin B1 (CCNB1), mRNA. |
cell division [goid 51301] [evidence IEA]; mitosis [goid 7067] [evidence IEA]; regulation of cell cycle [goid 74] [evidence IEA]; G2/M transition of mitotic cell cycle [goid 86] [evidence NAS]; cell cycle [goid 7049] [evidence IEA]; protein binding [goid 5515] [pmid 10373560] [evidence IPI]; nucleus [goid 5634] [evidence IEA] |
CCNB |
| ILMN_10006 |
NM_032752.1 |
ZNF496 |
Homo sapiens zinc finger protein 496 (ZNF496), mRNA. |
regulation of transcription, DNA-dependent [goid 6355] [evidence IEA]; transcription [goid 6350] [evidence IEA]; metal ion binding [goid 46872] [evidence IEA]; nucleic acid binding [goid 3676] [evidence IEA]; zinc ion binding [goid 8270] [evidence IEA]; protein binding [goid 5515] [pmid 16189514] [evidence IPI]; transcription factor activity [goid 3700] [evidence IEA]; nucleus [goid 5634] [evidence IEA] |
NIZP1; MGC15548 |
| ILMN_10009 |
NM_001014444.1 |
CRYM |
Homo sapiens crystallin, mu (CRYM), transcript variant 2, mRNA. |
visual perception [goid 7601] [pmid 1384048] [evidence TAS]; catalytic activity [goid 3824] [evidence IEA]; ornithine cyclodeaminase activity [goid 8473] [pmid 1384048] [evidence TAS] |
THBP; DFNA40 |
| ILMN_1001 |
NM_033128.1 |
SCIN |
Homo sapiens scinderin (SCIN), mRNA. |
positive regulation of megakaryocyte differentiation [goid 45654] [pmid 11568009] [evidence IMP]; barbed-end actin filament capping [goid 51016] [evidence IEA]; actin nucleation [goid 45010] [evidence ISS]; actin filament severing [goid 51014] [pmid 11568009] [evidence IMP]; negative regulation of cell proliferation [goid 8285] [pmid 11568009] [evidence IMP]; positive regulation of secretion [goid 51047] [evidence ISS]; positive regulation of apoptosis [goid 43065] [pmid 11568009] [evidence IMP]; calcium ion-dependent exocytosis [goid 17156] [evidence ISS]; phosphatidylserine binding [goid 1786] [evidence ISS]; calcium ion binding [goid 5509] [pmid 11568009] [evidence TAS]; phosphatidylinositol-4,5-bisphosphate binding [goid 5546] [evidence ISS]; phosphatidylinositol binding [goid 5545] [pmid 11568009] [evidence TAS]; actin filament binding [goid 51015] [evidence ISS]; cytoskeleton [goid 5856] [evidence IEA]; cell cortex [goid 5938] [evidence ISS] |
KIAA1905 |
| ILMN_10010 |
NM_000042.1 |
APOH |
Homo sapiens apolipoprotein H (beta-2-glycoprotein I) (APOH), mRNA. |
defense response [goid 6952] [evidence NR ]; lipid transporter activity [goid 5319] [evidence NR ]; heparin binding [goid 8201] [evidence IEA]; extracellular space [goid 5615] [evidence IEA] |
BG; B2G1 |
| ILMN_10011 |
NM_005904.2 |
SMAD7 |
Homo sapiens SMAD, mothers against DPP homolog 7 (Drosophila) (SMAD7), mRNA. |
regulation of transcription, DNA-dependent [goid 6355] [evidence IEA]; transforming growth factor beta receptor signaling pathway [goid 7179] [pmid 10823886] [evidence TAS]; response to stress [goid 6950] [pmid 9256479] [evidence TAS]; transcription [goid 6350] [evidence IEA]; transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity [goid 30617] [pmid 9215638] [evidence TAS]; receptor signaling protein serine/threonine kinase signaling protein activity [goid 5076] [evidence NR ]; protein binding [goid 5515] [pmid 9256479] [evidence TAS]; nucleus [goid 5634] [evidence IEA] |
MADH7; MADH8 |
| ILMN_10012 |
NM_001008539.1 |
SLC7A2 |
Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (SLC7A2), transcript variant 1, mRNA. |
transport [goid 6810] [pmid 8954799] [evidence TAS]; amino acid metabolism [goid 6520] [pmid 8954799] [evidence TAS]; amino acid transport [goid 6865] [evidence IEA]; basic amino acid transporter activity [goid 15174] [pmid 8954799] [evidence TAS]; amino acid permease activity [goid 15359] [evidence IEA]; membrane fraction [goid 5624] [pmid 8954799] [evidence TAS]; integral to membrane [goid 16021] [evidence IEA]; membrane [goid 16020] [evidence IEA]; integral to plasma membrane [goid 5887] [pmid 8954799] [evidence TAS] |
ATRC2; CAT-2; HCAT2 |
| ILMN_10013 |
NM_002289.2 |
LALBA |
Homo sapiens lactalbumin, alpha- (LALBA), mRNA. |
defense response to bacteria [goid 42742] [pmid 7644538] [evidence TAS]; lactose biosynthesis [goid 5989] [pmid 7708733] [evidence TAS]; cell-cell signaling [goid 7267] [pmid 7644538] [evidence TAS]; induction of apoptosis [goid 6917] [pmid 7644538] [evidence TAS]; signal transduction [goid 7165] [pmid 7644538] [evidence TAS]; lactose synthase activity [goid 4461] [evidence IEA]; calcium ion binding [goid 5509] [evidence IEA]; extracellular space [goid 5615] [pmid 7644538] [evidence TAS] |
|
| ILMN_10014 |
NM_020535.3 |
KIR2DL5A |
Homo sapiens killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 5A (KIR2DL5A), mRNA. |
receptor activity [goid 4872] [evidence IEA] |
CD158F; KIR2DL5; KIR2DL5.1 |
| ILMN_10016 |
NM_001362.2 |
DIO3 |
Homo sapiens deiodinase, iodothyronine, type III (DIO3), mRNA. |
hormone biosynthesis [goid 42446] [evidence IEA]; selenium binding [goid 8430] [evidence IEA]; thyroxine 5'-deiodinase activity [goid 4800] [pmid 7593630] [evidence NAS]; cellular component unknown [goid 8372] [evidence ND ] |
D3; 5DIII; TXDI3; DIOIII |
| ILMN_1002 |
NM_175053.2 |
K6IRS4 |
Homo sapiens keratin 6 irs4 (K6IRS4), mRNA. |
structural molecule activity [goid 5198] [evidence IEA]; intermediate filament [goid 5882] [evidence IEA] |
KRT5C; KRT6IRS4 |
| ILMN_10020 |
NM_003304.3 |
TRPC1 |
Homo sapiens transient receptor potential cation channel, subfamily C, member 1 (TRPC1), mRNA. |
cation transport [goid 6812] [evidence IEA]; calcium ion transport [goid 6816] [pmid 8646775] [evidence TAS]; store-operated calcium channel activity [goid 15279] [pmid 8663995] [evidence TAS]; calcium ion binding [goid 5509] [evidence IEA]; integral to plasma membrane [goid 5887] [pmid 7568191] [evidence TAS]; plasma membrane [goid 5886] [pmid 8663995] [evidence NAS] |
TRP1; HTRP-1 |
| ILMN_10021 |
NM_013975.2 |
LIG3 |
Homo sapiens ligase III, DNA, ATP-dependent (LIG3), nuclear gene encoding mitochondrial protein, transcript variant alpha, mRNA. |
cell cycle [goid 7049] [evidence IEA]; cell division [goid 51301] [evidence IEA]; meiotic recombination [goid 7131] [pmid 7565692] [evidence TAS]; spermatogenesis [goid 7283] [pmid 7565692] [evidence TAS]; DNA replication [goid 6260] [evidence IEA]; DNA repair [goid 6281] [pmid 7565692] [evidence TAS]; metal ion binding [goid 46872] [evidence IEA]; nucleotide binding [goid 166] [evidence IEA]; DNA ligase (ATP) activity [goid 3910] [evidence IEA]; DNA binding [goid 3677] [pmid 7565692] [evidence TAS]; ATP binding [goid 5524] [evidence IEA]; ligase activity [goid 16874] [evidence IEA]; nucleus [goid 5634] [pmid 7565692] [evidence TAS] |
|
| ILMN_10022 |
NM_004122.1 |
GHSR |
Homo sapiens growth hormone secretagogue receptor (GHSR), transcript variant 1b, mRNA. |
signal transduction [goid 7165] [evidence IEA]; G-protein coupled receptor protein signaling pathway [goid 7186] [pmid 8688086] [evidence TAS]; rhodopsin-like receptor activity [goid 1584] [evidence IEA]; growth hormone-releasing hormone receptor activity [goid 16520] [evidence IEA]; receptor activity [goid 4872] [evidence IEA]; integral to membrane [goid 16021] [pmid 8688086] [evidence TAS]; plasma membrane [goid 5886] [pmid 8688086] [evidence TAS] |
|
| ILMN_10023 |
NM_005525.2 |
HSD11B1 |
Homo sapiens hydroxysteroid (11-beta) dehydrogenase 1 (HSD11B1), transcript variant 1, mRNA. |
metabolism [goid 8152] [evidence IEA]; glucocorticoid metabolism [goid 8211] [pmid 10497258] [evidence NAS]; lipid metabolism [goid 6629] [evidence IEA]; oxidoreductase activity [goid 16491] [evidence IEA]; 11-beta-hydroxysteroid dehydrogenase activity [goid 3845] [pmid 10497258] [evidence IDA]; endoplasmic reticulum membrane [goid 5789] [pmid 10497258] [evidence IDA]; microsome [goid 5792] [evidence IEA]; integral to membrane [goid 16021] [evidence IEA]; membrane [goid 16020] [evidence IEA] |
HDL; 11-DH; HSD11; HSD11B; HSD11L; MGC13539; 11-beta-HSD1 |
| ILMN_10024 |
NM_144623.2 |
FLJ32784 |
Homo sapiens hypothetical protein FLJ32784 (FLJ32784), mRNA. |
|
FLJ43845 |
Total number of rows: 20589
Table truncated, full table size 8039 Kbytes.
| Supplementary data files not provided |
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