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Series GSE138370 Query DataSets for GSE138370
Status Public on Dec 17, 2019
Title Changes in calcium homeostasis and gene expression implicated in epilepsy in hippocampi of mice overexpressing ORAI1
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We showed that the overexpression of ORAI1 in the neurons of murine brain leads to spontaneous occurrence of seizure-like events in aged animals. We aimed to identify the mechanism responsible for this phenomenon. Using modified Ca2+-addback assay in the slices of CA1 hippocampal region and FURA-2AM calcium indicator we found that overexpression of ORAI1 in neurons leads to altered Ca2+ response. Next, by RNASeq we identified set of genes, whose expression was changed in FVB/NJ-Tg(ORAI1)Ibd mice.
 
Overall design We isolated total RNA from hippocampi of wild-type (n=3) and of FVB/NJ-Tg(Orai1)Ibd (n=3) females and performed RNAseq experiments.
 
Contributor(s) Wojtas B, Majewski L
Citation(s) 31698854
Submission date Oct 03, 2019
Last update date Oct 06, 2023
Contact name Bartosz Wojtas
E-mail(s) bartoszwojtas83@gmail.com
Phone 692156006
Organization name Nencki Institute of Experimental Biology
Street address Pasteura 3
City Warsaw
ZIP/Postal code 02-793
Country Poland
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (6)
GSM4106140 wt1
GSM4106141 wt2
GSM4106142 wt3
Relations
BioProject PRJNA575645

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138370_feature_counts.txt.gz 3.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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