|
| Status |
Public on Jun 21, 2022 |
| Title |
Aberrant EVI1 splicing contributes to EVI1-rearranged leukemia |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
35709354 |
| |
| Submission date |
Dec 10, 2021 |
| Last update date |
Jun 25, 2022 |
| Contact name |
Masaki Nomura |
| E-mail(s) |
masaki.nomura.fbri@gmail.com
|
| Organization name |
Foundation for Biomedical Research and Innovation at Kobe
|
| Street address |
6-3-7 Minatojima Minamimachi, Chuo Ward
|
| City |
Kobe |
| State/province |
Hyogo |
| ZIP/Postal code |
650-0047 |
| Country |
Japan |
| |
|
| Platforms (3) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (19)
|
| GSM5727304 |
293T cells expressing 3xHA_EVI1+18 |
| GSM5727305 |
Kp-EV |
| GSM5727306 |
Kp-HW |
| GSM5727307 |
Kp-H18 |
| GSM5727332 |
BM cells, Mx1-Cre_rep1 |
| GSM5727333 |
BM cells, Mx1-Cre_rep2 |
| GSM5727334 |
BM cells, Mx1-Cre_rep3 |
| GSM5727335 |
BM cells, Mx1-Cre Inv(3)_rep1 |
| GSM5727336 |
BM cells, Mx1-Cre Inv(3)_rep2 |
| GSM5727337 |
BM cells, Mx1-Cre Inv(3)_rep3 |
| GSM5727338 |
BM cells, Mx1-Cre Sf3b1-K700E_rep1 |
| GSM5727339 |
BM cells, Mx1-Cre Sf3b1-K700E_rep2 |
| GSM5727340 |
BM cells, Mx1-Cre Sf3b1-K700E_rep3 |
| GSM5727341 |
BM cells, Mx1-Cre Sf3b1-K700E: Inv(3)_rep1 |
| GSM5727342 |
BM cells, Mx1-Cre Sf3b1-K700E: Inv(3)_rep2 |
| GSM5727343 |
BM cells, Mx1-Cre Sf3b1-K700E: Inv(3)_rep3 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE190652 |
Aberrant EVI1 splicing contributes to EVI1-rearranged leukemia [ChIP-seq] |
| GSE190653 |
Aberrant EVI1 splicing contributes to EVI1-rearranged leukemia [K562_RNA-seq] |
| GSE190655 |
Aberrant EVI1 splicing contributes to EVI1-rearranged leukemia [mouse_RNA-seq] |
|
| Relations |
| BioProject |
PRJNA787920 |
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