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Sample GSM13164 Query DataSets for GSM13164
Status Public on Dec 04, 2003
Title Ileum 2A
Sample type RNA
 
Source name Whole segment, ileum, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) Pascale.Anderle@isrec.unil.ch
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL81
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
VALUE LN_I2_ADI nat. log transformed MAS5 data
VALUE LN_I2_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE VALUE LN_I2_ADI VALUE LN_I2_ADI_Norm
AFFX-MurIL2_at 15.1 2.715 2.443
AFFX-MurIL10_at 22.9 3.131 2.922
AFFX-MurIL4_at 11.3 2.425 2.109
AFFX-MurFAS_at 86.9 4.465 4.404
AFFX-BioB-5_at 435.3 6.076 6.062
AFFX-BioB-M_at 735.6 6.601 6.572
AFFX-BioB-3_at 652.1 6.48 6.461
AFFX-BioC-5_at 1321.1 7.186 7.13
AFFX-BioC-3_at 1170.9 7.066 7.02
AFFX-BioDn-5_at 1232.1 7.116 7.064
AFFX-BioDn-3_at 5980.1 8.696 8.551
AFFX-CreX-5_at 12122.2 9.403 9.247
AFFX-CreX-3_at 21429.6 9.973 9.843
AFFX-BioB-5_st 181.9 5.203 5.164
AFFX-BioB-M_st 69.7 4.244 4.183
AFFX-BioB-3_st 33.4 3.509 3.393
AFFX-BioC-5_st 26.4 3.273 3.091
AFFX-BioC-3_st 58.5 4.069 3.93
AFFX-BioDn-5_st 93.6 4.539 4.476
AFFX-BioDn-3_st 165.7 5.11 5.083

Total number of rows: 12488

Table truncated, full table size 328 Kbytes.




Supplementary data files not provided

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